Gene detail information of Glyur000014s00002534 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28480.1 | 7.00E-28 | Thioredoxin superfamily protein |
| NR | XP_004505534.1 | 8.99E-67 | PREDICTED: glutaredoxin-C9-like [Cicer arietinum] |
| Swissprot | tr|Q9SGP6|GRXC9_ARATH | 9.00E-41 | Glutaredoxin-C9 |
| trEMBL | tr|C6T0K0|C6T0K0_SOYBN | 7.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G13920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 332668 | 333141 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000014s00002534.1 | PF00462.19 | Glutaredoxin | 59 | 129 | 2.20E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.633 |
| SRR1783600 | control | 20.961 |
| SRR1783602 | moderate drought stress | 35.839 |
| SRR1811619 | moderate drought stress | 36.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.673 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.900 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.792 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 107.142 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 107.153 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.222 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.415 |
| SRR2868004 | Drought Stress (root) | 104.360 |
| SRR2967015 | Control (root) | 243.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.541 |
| SRR9715740 | Leaf | 45.807 |
| SRR9715741 | Leaf | 108.069 |
| SRR9715739 | Root | 170.955 |
| SRR9715742 | Root | 125.669 |
| SRR9715743 | Root | 140.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 485.210 |
| SRR8749028 | MeJA induced 9h | 322.880 |
| SRR8749029 | MeJA induced 9h | 346.102 |
| SRR8749030 | Uninduced | 143.974 |
| SRR8749031 | Uninduced | 210.140 |
| SRR8749032 | Uninduced | 165.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.605 |
| SRR8400027 | Control - Root | 42.516 |