Gene detail information of Glyur000014s00002511.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G44210.1 | 3.00E-20 | erf domain protein 9 |
| NR | XP_004505555.1 | 2.07E-95 | PREDICTED: ethylene-responsive transcription factor 4-like [Cicer arietinum] |
| Swissprot | tr|Q9FE67|ERF80_ARATH | 3.00E-50 | Ethylene-responsive transcription factor 9 |
| trEMBL | tr|Q2I2S8|Q2I2S8_MEDTR | 3.00E-89 | Ethylene-responsive element-binding protein {ECO:0000313|EMBL:ABC69353.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 205949 | 207226 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
| EAR motif-containing Proteins | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000014s00002511.1 | PF00847.15 | AP2 | 83 | 132 | 3.90E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.399 |
| SRR1783600 | control | 19.125 |
| SRR1783602 | moderate drought stress | 9.994 |
| SRR1811619 | moderate drought stress | 10.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 493.910 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 501.664 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 131.105 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 128.262 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 886.460 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 893.705 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 140.722 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 140.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.064 |
| SRR2868004 | Drought Stress (root) | 66.456 |
| SRR2967015 | Control (root) | 235.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 692.938 |
| SRR9715740 | Leaf | 665.789 |
| SRR9715741 | Leaf | 659.940 |
| SRR9715739 | Root | 1127.886 |
| SRR9715742 | Root | 980.303 |
| SRR9715743 | Root | 966.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1266.919 |
| SRR8749028 | MeJA induced 9h | 1154.042 |
| SRR8749029 | MeJA induced 9h | 1044.458 |
| SRR8749030 | Uninduced | 642.443 |
| SRR8749031 | Uninduced | 367.764 |
| SRR8749032 | Uninduced | 892.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 107.165 |
| SRR8400027 | Control - Root | 189.842 |