Gene detail

Gene detail information of Glyur000014s00002507

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G20635.1	2.00E-180	ATP binding;protein kinases;protein serine/threonine kinases
NR	XP_003540927.1	0	PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1-like [Glycine max]
Swissprot	tr\|F4IVI0\|BUB1_ARATH	0	Mitotic checkpoint serine/threonine-protein kinase BUB1
trEMBL	tr\|K7LU99\|K7LU99_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G13255.1}

Sequence

Transcript Sequence

>Glyur000014s00002507.1
ATGGCCATGCTCCACAACTCCCCTGCTTTCAGAATCGCCAAAGACGACGCTCACCACGACCCTCTCTTACCCTTTCTCTGGTCGATCAGGAAAGCCCTAGAAGATTCCAACGATTCTGGTCCGACTCTCAGTAAATTACTCAGAGATTGCACCAGAAAATTCAAGGACAATGACCGGTACCGAAACGACATCAGATTTCTCAAGATTTGGCTCCTCTATATGGGAGTTAGTACGGATTTTGATAGTGTTTTCAGAGAAATGCTGGCTAGTAATGTATGTGCCAACAATTCCTCACTTTATGTGTGGTCTGCGTGTTTTTTTGAATCCAAGGGTAGATTGCGTGATGCCCTCGCGGTCTATCAGCTCGGCATTTGCAGGTCAGCGCAGACCTTATTTCTCAATCGAATTTCTGAAATATGGCATGCTGCTTCAAGCCAGAAGGTTGATTATAAAGAATCTGCAAAATTGGAAAATAGTGGCATTAATCCATGGGACACCTCTACCATGGATGACCTTTCGAAGAAAATATATCCTTTAATTACGAAATTTGATGGCTATCATTCGAGCACTAAATCTTATACAGGGAAAGTGGCCTTGTCTACTTTGAAGAATGCATCAAGGAATAAAGGCTGTGCTGGACAGGGTGGTTTTGCTCAAGTATACAAAGCATATGTCAACAGTGATCCTGATGATGTTGTGGCACTAAAGATACAAAAGCCAGCTTTCTCTTGGGAATTTTACATGTATCGTCAGCTTGATCAGCGCATCTCTGGCAGAGAAAGGTCAAGCTATGGCTTCGCTCATAGAATTCATCACTATTCTGACTGTAGCATACTCGTTTGTAACTATTTAGCTCACGGGACACTACAGGATGTCATAAACTCATACGTGGTCCTAGGAAAATCCATGGAAGAAGTGTTATGCATTTATTACACAACAGAAATGTTACACATGATTGAAACTTTGCATAATGTTGGCTTGATTCATGGTGATTTCAAGCCCGATAATCTGCTTATTCGCTATGCTAGGGGTGACCTTTCAGAAGATGGGTTCTTGGACCGAAGTGGCTCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTACATCTTTTTCCAGATCAAACGGTATTTAAGGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCAAGAGGATAAGCCGTGGAAATTTCAGGTAGACTCATATGGCCTTTGCGCTGTTGTCCATATGATGCTGCATAATTCCTATATGGATATCGTCAAAAAAGAATCATCTGATGGGGACTACGTGTATCTTCCAAGACTACCCTTTAAACGTTACTGGAACATTGAGCTCTGGAAGACTTTCTTCACTAAGATGCTAAATAAATACCCCGGCGATGATGATAGAAGTTTGCTGCAGGATTTGAAGAAGTCCTTCCAGGACTATATGGGCTCCGATCCCCAGCTTATAAAGAAACTAAAGGAGTTACTCGCGAAGCAAAGGGTTTCTCTGTGTTCTGCTTAGTGTTTTACGATCATTACACATCCACTTCTGCATTAACCGTCTTGCAGCTGCTGAGTGCATAATATTCTTTTTTAGAAAGGGAGAAAAATACACAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00014	163627	169290	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:3.1.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K02178	BUB1	EC:2.7.11.1	Cell cycle	map04110
			Cell cycle - yeast	map04111
			Meiosis - yeast	map04113
			Oocyte meiosis	map04114
			Progesterone-mediated oocyte maturation	map04914

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000014s00002507.1	PF08311.7	Mad3_BUB1_I	12	124	3.70E-20
Glyur000014s00002507.1	PF00069.20	Pkinase	210	423	6.40E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.301
SRR1783600	control	2.299
SRR1783602	moderate drought stress	0.587
SRR1811619	moderate drought stress	0.569

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.352
DRR006520	Root Summer glycyrrhizin high producing strain	1.322
DRR006521	Root Winter glycyrrhizin high producing strain	0.249
DRR006522	Root Winter glycyrrhizin high producing strain	0.162
DRR006523	Root Summer glycyrrhizin low producing strain	0.503
DRR006524	Root Summer glycyrrhizin low producing strain	0.482
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.280
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.374

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.390
SRR2868004	Drought Stress (root)	2.094
SRR2967015	Control (root)	1.743

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.850
SRR9715740	Leaf	0.679
SRR9715741	Leaf	0.805
SRR9715739	Root	0.366
SRR9715742	Root	0.703
SRR9715743	Root	0.781

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.763
SRR8749028	MeJA induced 9h	4.607
SRR8749029	MeJA induced 9h	3.003
SRR8749030	Uninduced	0.758
SRR8749031	Uninduced	0.231
SRR8749032	Uninduced	0.567

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.699
SRR8400027	Control - Root	3.495