Gene detail information of Glyur000014s00002503 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20650.2 | 0 | RING/U-box superfamily protein |
| NR | XP_004505562.1 | 0 | PREDICTED: transmembrane E3 ubiquitin-protein ligase 1-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072UNS6|A0A072UNS6_MEDTR | 0 | RING/U-box protein {ECO:0000313|EMBL:KEH30698.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 148285 | 155036 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.551 |
| SRR1783600 | control | 7.464 |
| SRR1783602 | moderate drought stress | 7.225 |
| SRR1811619 | moderate drought stress | 7.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.747 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.414 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.048 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.639 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.362 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.025 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.530 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.257 |
| SRR2868004 | Drought Stress (root) | 38.776 |
| SRR2967015 | Control (root) | 33.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.112 |
| SRR9715740 | Leaf | 15.077 |
| SRR9715741 | Leaf | 18.059 |
| SRR9715739 | Root | 5.149 |
| SRR9715742 | Root | 9.074 |
| SRR9715743 | Root | 9.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.780 |
| SRR8749028 | MeJA induced 9h | 20.193 |
| SRR8749029 | MeJA induced 9h | 16.825 |
| SRR8749030 | Uninduced | 13.769 |
| SRR8749031 | Uninduced | 15.345 |
| SRR8749032 | Uninduced | 11.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.671 |
| SRR8400027 | Control - Root | 24.280 |