Gene detail

Gene detail information of Glyur000014s00002495

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G49190.1	4.00E-42	O-acyltransferase (WSD1-like) family protein
NR	KHN35242.1	0	O-acyltransferase WSD1 [Glycine soja]
COG	YP_004010866.1	7.00E-07	acyltransferase, WS/DGAT/MGAT [Rhodomicrobium vannielii ATCC 17100]
Swissprot	tr\|Q93ZR6\|WSD1_ARATH	4.00E-36	O-acyltransferase WSD1
trEMBL	tr\|G7JTU1\|G7JTU1_MEDTR	0	O-acyltransferase WSD1-like protein {ECO:0000313\|EMBL:AES89670.2}

Sequence

Transcript Sequence

>Glyur000014s00002495.1
ATATATAATCAAAGCTAGTTCCATGCCTTATCAGTTAAGTTGTATATCTTTTTTTTTTAATCAAAAAAAGATATACAACGTAATTGCTATATATATCATTCATCCCAACTTGGCTTTGTCGCAGCCAATTGTCTAATTGAAGTCCTATATACATCAAATCAAATTTCTAACCCCCCACACTAATTAACACCACACCACAATGGACAAATTCTATGAAGAGGTTCAACAGCCAGTGAGTCCTCCTGGACAATACTTCAACAGCTCAGTGATATGTTCATATGTTTTTGGCTTTATGGAATTAGCAGTTCCAATTGATGACTCACATGCTATCCCTTTGCTCAAAGATGTTTTCCTCCCTATCAATCCACGTTTCTCCTCTATTATGGTAAGAGACAGAGAGGGTAAGATGAGGTGGCAACAGGTTGAAGTGAAGCCCGAAGAGCACCTAAGGATTCCCATATTTCCTGATCACAGCACTAATTCATCATCTGAATTATATGATCAGTATCTTGATGACTATGTATCAAGGATTCTAACTGAGAGAACGCCTCAAGACAAGCCACTATGGGAAATCCATATCATCAAGTACCCAACAACCAATGCTGCTGGCACCTTGATATTCAAACTTCACCATGCTCTTGGGGATGGTTATTCCCTCATGGGTGCTCTTCTGTCTTGTCTGAAAAGAGCTGATGACCCTTCTCTCCCACTATCTTTTCCCTCACGAACACAACCAGATTATGCAAAGAAAAGCCTTTTTAAGAAGTTGCATTCGGATATCTCCTCCTTTTTTAGCTCCTTATCAGATTTTGGATCAAGTTTAATCAAGACAAGGATGATTGAAGATGACAAAACACCTATAAGGTCAGGATATGAAGGAACTGAGTCTCAGCCTTTTGCCTTGTCAAACATATCATTATCTCTTGATCATATCAAAGGAATCAAGCTTTACATGCAAGAGATGAATGACAAGACAAAAACAGCAAATTCCACAGCTGTGGTCATGCTCAACACAAGAGATATTGGAGGTTACCAGTCAATCAAGGAGATGCAAAAACCTGGGTCCAAAGGTCTTTGGGGGAACCGAATTTCTTTCTTACAAGTAGCAATACCTAAGCTAAGCCAATCCACAATCTCCAACCCTCTTGAGTTTGTTTGGAGTGCCCATAAACAAATCAAGAGGAAGAGACGTTCTTTCAGTGTTCATCTCATAGGCCTGCTCTTGGATTTGGAGATGAAATTAAGAGGGCCCGAGGCTGTAGCTAAAATAATCTATAACACTCTGGGGAACTCTAGTGTTGTTCTCTCTAACTTAATTGGGCCAGTAGAGCATATGGTTTTGGAAAATCATCCTATAAATGGCTTGTATTTCACCATGACAGGTGGACCTGAGAATGTAAACATTACAATTGTGAGCTATGTGGAAACATTAAGAATCACCCTGAGAACACTAAAGGGATTCATAGATGAACTAAAACTCAAGNTCTGCATGGAGAAAGCTGTTGAAGACATATCCAAAGCAGCTACGGATATCTCCGAGATACCCAAGAATAAATAGATACATATGTATTCATTGAAAAGAGATTTGAGATACAAATAAATAACAGGATATCATTGTATTTTTAAGTTTNATAATATAAATTAATGTTCTTTGAGTCAATAATGCAGATACAGTCCCCTCCACTTTACTTTTAAACTGCATAAGACCATGATCCTTCAAAAGGACTATTGATAAGTTTGATACAATTGCTTCCTTGTAAAAGCGGTTCTTTCTGGAAGTTCACCAATTTTTAGCCTAGCTACTTGGATAATTTCCTTTTGTATTCTGTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00014	123233	126071	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0045017 glycerolipid biosynthetic process

molecular_function
GO:0004144 diacylglycerol O-acyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000014s00002495.1	PF03007.11	WES_acyltransf	103	209	4.70E-08
Glyur000014s00002495.1	PF06974.8	DUF1298	288	441	4.70E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.040
SRR1783600	control	0.038
SRR1783602	moderate drought stress	0.041
SRR1811619	moderate drought stress	0.062

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.173
DRR006522	Root Winter glycyrrhizin high producing strain	0.174
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	27.769
DRR006526	Leaf Summer glycyrrhizin high producing strain	27.405

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.221
SRR2868004	Drought Stress (root)	0.054
SRR2967015	Control (root)	0.101

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	47.542
SRR9715740	Leaf	72.009
SRR9715741	Leaf	40.394
SRR9715739	Root	0.095
SRR9715742	Root	0.069
SRR9715743	Root	0.034

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.117
SRR8749028	MeJA induced 9h	0.181
SRR8749029	MeJA induced 9h	0.068
SRR8749030	Uninduced	0.238
SRR8749031	Uninduced	0.085
SRR8749032	Uninduced	0.081

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.216
SRR8400027	Control - Root	0.086