Gene detail information of Glyur000014s00002491 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32480.1 | 2.00E-68 | Protein of unknown function (DUF506) |
| NR | AFK33555.1 | 1.43E-148 | unknown [Lotus japonicus] |
| trEMBL | tr|I3RZW3|I3RZW3_LOTJA | 5.00E-149 | Uncharacterized protein {ECO:0000313|EMBL:AFK33555.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 97069 | 98292 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000014s00002491.1 | PF04720.7 | DUF506 | 24 | 252 | 3.30E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.242 |
| SRR1783600 | control | 1.261 |
| SRR1783602 | moderate drought stress | 2.871 |
| SRR1811619 | moderate drought stress | 2.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.708 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.648 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.247 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.217 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.104 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.750 |
| SRR2868004 | Drought Stress (root) | 3.541 |
| SRR2967015 | Control (root) | 13.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.073 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.037 |
| SRR9715739 | Root | 0.970 |
| SRR9715742 | Root | 0.733 |
| SRR9715743 | Root | 0.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.029 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.850 |
| SRR8400027 | Control - Root | 5.557 |