Gene detail information of Glyur000013s00003278 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12490.1 | 9.00E-57 | cystatin B |
| NR | XP_004493324.1 | 5.48E-120 | PREDICTED: cysteine proteinase inhibitor 12-like [Cicer arietinum] |
| Swissprot | tr|Q0JNR2|CYT12_ORYSJ | 4.00E-79 | Cysteine proteinase inhibitor 12 (Precursor) |
| trEMBL | tr|I3SCL7|I3SCL7_LOTJA | 3.00E-117 | Uncharacterized protein {ECO:0000313|EMBL:AFK38009.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00013 | 657158 | 661202 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000013s00003278.1 | PF00031.16 | Cystatin | 49 | 122 | 9.60E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.674 |
| SRR1783600 | control | 30.910 |
| SRR1783602 | moderate drought stress | 32.252 |
| SRR1811619 | moderate drought stress | 32.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.621 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.754 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 32.380 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.884 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.846 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.276 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.109 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 85.791 |
| SRR2868004 | Drought Stress (root) | 94.278 |
| SRR2967015 | Control (root) | 71.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 55.940 |
| SRR9715740 | Leaf | 57.445 |
| SRR9715741 | Leaf | 73.204 |
| SRR9715739 | Root | 45.603 |
| SRR9715742 | Root | 55.587 |
| SRR9715743 | Root | 58.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 107.541 |
| SRR8749028 | MeJA induced 9h | 78.817 |
| SRR8749029 | MeJA induced 9h | 73.345 |
| SRR8749030 | Uninduced | 34.888 |
| SRR8749031 | Uninduced | 26.052 |
| SRR8749032 | Uninduced | 47.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 56.270 |
| SRR8400027 | Control - Root | 49.085 |