Gene detail information of Glyur000013s00003273 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07050.1 | 3.00E-111 | nodulin MtN21 /EamA-like transporter family protein |
| NR | XP_006604312.1 | 0 | PREDICTED: WAT1-related protein At5g07050-like [Glycine max] |
| COG | YP_001253694.1 | 8.00E-08 | hypothetical protein CBO1167 [Clostridium botulinum A str. ATCC 3502] |
| Swissprot | tr|Q9FL41|WTR38_ARATH | 1.00E-169 | WAT1-related protein At5g07050 |
| trEMBL | tr|I1N8N1|I1N8N1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G30640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00013 | 636368 | 639243 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000013s00003273.1 | PF00892.15 | EamA | 27 | 157 | 1.20E-11 |
| Glyur000013s00003273.1 | PF00892.15 | EamA | 204 | 332 | 3.40E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 38.402 |
| SRR1783600 | control | 38.505 |
| SRR1783602 | moderate drought stress | 22.730 |
| SRR1811619 | moderate drought stress | 22.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.694 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.532 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.323 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.278 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.445 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.632 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.099 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 59.454 |
| SRR2868004 | Drought Stress (root) | 48.106 |
| SRR2967015 | Control (root) | 43.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.744 |
| SRR9715740 | Leaf | 33.119 |
| SRR9715741 | Leaf | 21.038 |
| SRR9715739 | Root | 12.391 |
| SRR9715742 | Root | 75.079 |
| SRR9715743 | Root | 59.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.097 |
| SRR8749028 | MeJA induced 9h | 7.402 |
| SRR8749029 | MeJA induced 9h | 1.191 |
| SRR8749030 | Uninduced | 0.522 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.232 |
| SRR8400027 | Control - Root | 18.726 |