Gene detail

Gene detail information of Glyur000013s00003256

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G56690.1	6.00E-134	Cam interacting protein 111
NR	KHN12173.1	0	Calmodulin-interacting protein 111 [Glycine soja]
COG	YP_008796574.1	3.00E-172	AAA family ATPase [Candidatus Caldiarchaeum subterraneum]
Swissprot	tr\|Q9LET7\|CI111_ARATH	2.00E-150	Calmodulin-interacting protein 111
trEMBL	tr\|K7KEM2\|K7KEM2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G27900.3}

Sequence

Transcript Sequence

>Glyur000013s00003256.1
ATGCCTTCGAATTCAAAGCACAAGAAGCAATCGAAAGCGCACTCAAGGTTATCATCTCCCGAAGCAGCCACTCCTCCACCCAGGCCTTCTGAATCATCTCTTCAACCGCAACAACTCGCCTCTCTCTGCCGAGAAGCTTCTCGAAGGTTCCCTTCTTTCATCGCCGAGTCAGCTTTCGTGGGCGAAATCACTGACGTTGAGAATGACCCTCTTTCCAAGGGCTCTAAAATCTGGCTTTCCGAGCCTTCCATGGTGTCTATTCCATCTTCAAGTACAAAATTGCATCAGGGCTTTCCTCTCATGTCATTGGCTGATGAATGTATCAAATGCTACGGGTTGGAAACCTGTAAGATATTGGATGATGATGCTGCGGGAAAATACTTTGCACTTGCAACAGTATATCCTTCTAAGAAGGTTTTGAAGAATGGAGTACNCTTGTCTTCGAATCTTTCTATTACCATGGGATGTCCACCTATGAGCACAAATGTGTTTGTTCACCAATTACAGGAACAGTACTTAGCTTCAAATGGGAGGAATGAACTGCATTCTANAGAAAATAATCGTTTGTTAGTATATAATTGCAAGGAATTATATCTTCAGTTGGCTCCCTGTAAGGATGGACTACCATTGAAATTTAATAACTTNCCCTCCTTGGACTTATCGAAGGCGAAATCCCGTGTCCAATCCGAGAATGATATTGTTGCATCTCCTAAAACGCCTTCTTATGGATCAAGATTTTCTAATGGTAGTGTGTTGTCTTCCCCAGTATTTGAAGATTCAGCATCAAGTGTAGCCAATCAGAATAGTCAATTGGTGGCTTCATTTGATGTTAGCGAGGCATTAGGGAACGAAACTTCCAAAAAACTACTACAGACATGTGCAACTTCATGGTTATATTCTCGTTGTTTACTGCTAGGGAATCTTTTCAATGTCCCAATGTTTTCAGAGTTGTGCATTTTCCAAGTGACNGGAGCTAAAACGGTGACAGATACCATACTTGATTGTTATCCATTGATTGGGAGCAGTAATTTAGATCTTGAGGATTCTGATACAAAAGAGAATGTAAATCTGGTTTTCACTGTCAATTTGGAAACAAAAGTATTTTTATNTCCGCCATCAAATGCAGCAGTTGAAGAGTCAATTCAAAGGGATTTGTCATGCATGAAACTTAATCACAAGGTTGCTAATGTTAGCATACGTGATAGTATTTCTAAGTTGGGTGGTCTTTCTAAAGAATATACTCTTTTAAAGGATATAATTTCTTCATCAGTAAAAGATGTTTTATCAAGTTTTGGTTTACGAGCTACAAGAGGAGTCCTTCTTCATGGTCCACCTGGTACAGGAAAGACTTCCCTGGCTCAATTATGTGCTCATGATGCCGGTGTCAGTTTTTTTCCAATAAATGGACCTGAAATTATTAAACCGTATTATGGGGAAAGTGAGCAAGCATTGCATGAAGTTTTTGATTCAGCCATTCAAGCTGCACCTGCTGTGGTATTCATTGATGAAGTAGATGCAATAACCCCTACAAGGAAAGACGGAGGTGAAGAGCTATCTAAAAGATTGGTTGCAACTTTATTGAATTTGATGGATGGAATTGGTAGAAATGAAGGTTTATTTGTGATTGCTGCCACTAATAGGCTTGACCTTATTGAGCCAGCTCTCAGACGACCTGGAAGATTTGACAAGGAAATTGAAATTGGTGTGCCATCCCCCAGCCAACGAAAAGATATTTTGGACACTCTTCTCTCTGAAGTGCATCACTCTCTCAATGACCAACAAATTAAAGACCTTGCCACTGTNACTCATGGTTTTGTGGGTGCTGATCTAGCTGGCCTTTGCAACGAGGCAGCCTTTATTTGTCAACGACGTTATGCTAGTCTTGTATTACCTTCCTACATGATGGGAGCAACTTCTGAAATTATGGGAATAATTCCTGATAGCGGTGAAGAAAAGCATATGAAAGTAAATTTTGAAGATTTTCAGAAGGCTAGGATGAAAATAAGACCAAGTGCCATGAGAGAGGTAAACCTTCAGGTTCCAAACGTTAATTGGGGTGATGTTGGTGGCCAGAAGGAGATCAAATCTCAATTGAAGGAAGCAGTGATATGGCCCCAAAAACACCATGATGCATTTGTCCGTATTGGGACTAGCCCTCCAACAGGTGTATTGATGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGTGCAGTTGCTTCTGAAGCAGGACTGAACTTTCTAGCAGTAAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGCGAATCTGAGAAGGCTGTCAGAGCATTGTTTGCAAAAGCAAGGGCCAATGCACCATCAATTGTATTTTTCGATGAAATAGATGCTCTTGCAGGAACTCGTGGGACGGAAAGTGATGGTGTTTCAGTGTCAGATAGGGTCATGAGTCAACTTCTTGTTGAATTGGATGGTCTGCATCAAAGAGTTAATGTTACTGTCATAGCTGCTACAAATAGGCCAGACAAGATTGATCCTGCTCTTTTAAGACCAGGACGCTTTGACCGTTTGCTATATGTTGGACCTCCAAATGAGCTGGATAGAGTAGCGATATTTCGCATTCATTTGCCTGAATGTGGTCCTGATGTTAGTCTTGAAGAACTGGCTCGACTGACAGATGGTTATACAGGGGCTGACATAGCACATATATGTCGAGAAGCAGGTGTTGCGGCAATTAAGGAGAGCCTTGATGCTTCAGTTATAACAATGGAGCACTTAAAGATGGCAATCCAACAATTCCAGCCAACAGAAGTTCAGTCCTACCAAAAGCTGTCAGCAAAATTTCAAAGGGCCGTTCACTGCTGTGATATAAAAGTTGAATCCAATCATATGCAGTGTAACAGTTGATCTACTTGGTTCAACATTTGGTAAACATTTCTTATTCCAGCATGCGATGTTTAGAATATTTTGGCTGAGAGCAATGCGTGTACAGATTATTCTTTTTTTGGCTATTCAATTCGTATGTTGCAGTCCTGGAGTGCTTTTACCACACCCCACTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00013	539786	547209	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000013s00003256.1	PF00004.24	AAA	439	568	4.90E-39
Glyur000013s00003256.1	PF00004.24	AAA	723	854	4.50E-44

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.074
SRR1783600	control	3.104
SRR1783602	moderate drought stress	2.509
SRR1811619	moderate drought stress	2.537

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.509
DRR006520	Root Summer glycyrrhizin high producing strain	6.262
DRR006521	Root Winter glycyrrhizin high producing strain	2.947
DRR006522	Root Winter glycyrrhizin high producing strain	2.904
DRR006523	Root Summer glycyrrhizin low producing strain	5.387
DRR006524	Root Summer glycyrrhizin low producing strain	5.492
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.303
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.153

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.559
SRR2868004	Drought Stress (root)	3.681
SRR2967015	Control (root)	3.099

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.536
SRR9715740	Leaf	3.460
SRR9715741	Leaf	2.302
SRR9715739	Root	1.555
SRR9715742	Root	4.818
SRR9715743	Root	4.194

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.291
SRR8749028	MeJA induced 9h	5.223
SRR8749029	MeJA induced 9h	4.405
SRR8749030	Uninduced	0.646
SRR8749031	Uninduced	0.448
SRR8749032	Uninduced	0.611

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.695
SRR8400027	Control - Root	6.505