Gene detail

Gene detail information of Glyur000013s00003218.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06950.4	2.00E-108	bZIP transcription factor family protein
NR	XP_004493401.1	0	PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Cicer arietinum]
Swissprot	tr\|O24160\|TGA21_TOBAC	0	TGACG-sequence-specific DNA-binding protein TGA-2.1
trEMBL	tr\|G7KQS1\|G7KQS1_MEDTR	0	Leucine zipper transcription factor {ECO:0000313\|EMBL:AES81211.1}

Sequence

Transcript Sequence

>Glyur000013s00003218.2
AACATCATTAACAATAAAATATTAAAGTGGTATTCCCTTCCCTTCGATCAAAAAAGTNAAAAAGTCTCGGTATTTATCGTCGACTTGTCACTGGTTAGGGTTCGCACTGCTATTTTCCCATCGGTTTCTTCTTCTGGGGCCTCCTTGGATTAAGGTTTGTGGGGGAGATATAAGATAAGATGATCGTTGTGCTGGGCATGGTTATTGATGGGTAGTAGAAGTAGAACGGCAAACGTTAACACTGAGGGCACTAACAAGGTTGTAAACAACGGGATGCCAAGCTACGCTCCTCCATTGCCTCCTTCTTCTAGTTCCATGGGCATGGAAGCAAATAATATTCATCCTTCTCGAATGTCTGAATTTGGAACACTTGAGCAATCTCTTGGATTTCGNGTTGAGGATGCCATGAGTCTTAGCAGAAATCCGGTGTTTAATCAAATGAAATCAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAGTAAGTCAATTGCAAACTCGGATATAAACCTCTCTGCTGCAATTGCTGGCTCTCAGACACTGCCATTACAAAAAGACTCGNATCCAAATCTGGCTTCAACATCTGGTGTTCATCGTGAGAACTGGGGAGAGTCCAACATGGCTGATGGAAGCCCTAGGACTGATACTTCAACAGATGATACAGATGATAAAAATCAAAGGGGTGAAAGGGGAGAATCCAGTGAGAGATCAAAAGATAAATCAGATCAAAAGACATTAAGACGTCTAGCTCAAAATCGTGAGGCTGCAAGAAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGTAGTAGGCTGAAACTGACCCAACTGGAGCAAGAGCTCCAGCGAGCGCGCCAGCAGGGAATATTTATATCAAGCTCCGGAGATCAGGCCCATTCAATTAGTGGAAATGGTGCTATGGCATTTGATGTAGAATATGCACGATGGTTAGAAGAGCACAATAGGCAAACCAATGAGCTAAGGGCTGCAGTAAATTCTCATGCTGGAGATATTGAACTTCGTACCATTGTCGACAATTTCATGACACAATTTGAAGATATCTACAGGCTGAAAGGTATTGCAGCAAAAGCTGATGTTTTCCACATTCTGTCAGGAATGTGGAAGACTCCGGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTCCGCTCATCCGAACTTCTCAAGCTTCTTGTAAGTCAATTGGAGCCTTTAACTGAGCAACAATTGATGGGCATCTACAACTTGCAACAGTCATCCCAACAGGCTGAGGATGCACTCTCCCAAGGAATGGATGCATTGCAGCAATCACTATCTGAAACATTGGCCAATGGTTCACCCAACCCATCAGGTTCTTCAGGAAATGTGGCAAANTACATGGGGCAAATGGCCATGGCCATGGGGAAGCTCGGCACTCTTGAGGGGTTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACGTTGCAACAAATGCTCCGGATATTAACAACGAGGCAATCAGCTCGAGCTCTTCTNGCAATAAGCGATTATTTCTCCAGGCTGCGAGCCCTGAGTTCTCTATGGCTTGCACGGCCAAGGGAGTGAAGTGGGTTTCAAAGCTCCCATGTATGGAGTGTTTCTTTCAAGCCTGACCCCTTAAAAGATTATTATTGATCATATCTTCAACACGAGCATTGAATCAATGTTCTGCTTTTAAGNGAGTCCAAAGGAAGCAATGAATTCCTCTAGAGAAGCCTAGTTGTGGTGCTGTAAAATTAGTTACTGTGATTTTTCTTCTCTCCTCCGCCTACTGCTGGTGTGGTACAACATTTTTATTTTAACCTTTTCTTTTCTTCTATGCTTTTAAAAATAGTCTCAATAATTTGATTATATAGGTGTATGATGTAGAGATAGAGTTGAAGGGGGAAAATGTAGAATAGTATTTGTATTTTAGGTTACAGCTGTTCATTGTATTTCAGAAATTAAGCCTATTTGAGGAATATTTTACTCTCTTTTAGTTTATTTTCCTGCTGAATGGTTTGTGGTTGCACATACGCCTTCATGGATCTGCGTGCTGGTGTATGTATGTACATATATATATACACTTTCTATTGCTATAATNAGAAAGACATTACTAACTGGTAAGTGGTAACTGAGTATTATGTCTCGTGACAAATATATGTATATAGTATATCTACTCTTTCATGAGAAAAATGTGGTTGCCTCTTTTGAAGATGCATGTTCGGATATGTTTTTAACTCTATTGATTATGTAGGTTATATCTGCAGACTGCAAATACGAGAGCAAATTGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00013	252775	258977	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006351 transcription, DNA-templated

GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000013s00003218.2	PF00170.16	bZIP_1	176	218	3.40E-07
Glyur000013s00003218.2	PF14144.1	DOG1	259	337	8.00E-31

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	30.108
SRR1783600	control	29.929
SRR1783602	moderate drought stress	39.688
SRR1811619	moderate drought stress	39.592

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	47.158
DRR006520	Root Summer glycyrrhizin high producing strain	47.218
DRR006521	Root Winter glycyrrhizin high producing strain	37.654
DRR006522	Root Winter glycyrrhizin high producing strain	36.299
DRR006523	Root Summer glycyrrhizin low producing strain	64.900
DRR006524	Root Summer glycyrrhizin low producing strain	63.971
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.481
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.808

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	73.247
SRR2868004	Drought Stress (root)	99.378
SRR2967015	Control (root)	104.322

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	37.079
SRR9715740	Leaf	39.158
SRR9715741	Leaf	57.202
SRR9715739	Root	24.699
SRR9715742	Root	60.245
SRR9715743	Root	54.453

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	46.003
SRR8749028	MeJA induced 9h	83.081
SRR8749029	MeJA induced 9h	63.335
SRR8749030	Uninduced	42.396
SRR8749031	Uninduced	75.997
SRR8749032	Uninduced	54.016

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	77.211
SRR8400027	Control - Root	70.358