Gene detail information of Glyur000013s00003198 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41380.1 | 3.00E-89 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | AFK45765.1 | 1.12E-159 | unknown [Lotus japonicus] |
| COG | YP_007319296.1 | 6.00E-52 | hypothetical protein FAES_0692 [Fibrella aestuarina BUZ 2] |
| trEMBL | tr|I3SZS3|I3SZS3_LOTJA | 4.00E-160 | Uncharacterized protein {ECO:0000313|EMBL:AFK45765.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00013 | 107364 | 108616 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000013s00003198.1 | PF08241.7 | Methyltransf_11 | 39 | 128 | 8.20E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.189 |
| SRR1783600 | control | 1.243 |
| SRR1783602 | moderate drought stress | 2.224 |
| SRR1811619 | moderate drought stress | 2.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.568 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.156 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.324 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.506 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.319 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.322 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.548 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.904 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.652 |
| SRR2868004 | Drought Stress (root) | 5.496 |
| SRR2967015 | Control (root) | 3.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.764 |
| SRR9715740 | Leaf | 7.660 |
| SRR9715741 | Leaf | 8.015 |
| SRR9715739 | Root | 1.390 |
| SRR9715742 | Root | 0.774 |
| SRR9715743 | Root | 0.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.428 |
| SRR8749028 | MeJA induced 9h | 60.112 |
| SRR8749029 | MeJA induced 9h | 70.837 |
| SRR8749030 | Uninduced | 72.654 |
| SRR8749031 | Uninduced | 149.872 |
| SRR8749032 | Uninduced | 85.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.975 |
| SRR8400027 | Control - Root | 4.320 |