Gene detail information of Glyur000013s00003181 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41250.1 | 1.00E-105 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| NR | XP_004493428.1 | 8.74E-171 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3-like [Cicer arietinum] |
| COG | NP_924298.1 | 2.00E-27 | hypothetical protein gll1352 [Gloeobacter violaceus PCC 7421] |
| trEMBL | tr|I3T9E2|I3T9E2_LOTJA | 1.00E-163 | Uncharacterized protein {ECO:0000313|EMBL:AFK49134.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00013 | 20996 | 26443 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000013s00003181.1 | PF13419.1 | HAD_2 | 68 | 257 | 1.20E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 61.976 |
| SRR1783600 | control | 62.045 |
| SRR1783602 | moderate drought stress | 57.644 |
| SRR1811619 | moderate drought stress | 57.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 201.836 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 199.143 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 47.482 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.966 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 142.632 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 142.199 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.203 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.965 |
| SRR2868004 | Drought Stress (root) | 39.766 |
| SRR2967015 | Control (root) | 27.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 50.148 |
| SRR9715740 | Leaf | 96.555 |
| SRR9715741 | Leaf | 72.025 |
| SRR9715739 | Root | 62.876 |
| SRR9715742 | Root | 80.336 |
| SRR9715743 | Root | 75.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.017 |
| SRR8749028 | MeJA induced 9h | 13.971 |
| SRR8749029 | MeJA induced 9h | 12.961 |
| SRR8749030 | Uninduced | 11.019 |
| SRR8749031 | Uninduced | 11.306 |
| SRR8749032 | Uninduced | 7.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 98.353 |
| SRR8400027 | Control - Root | 105.058 |