Gene detail information of Glyur000012s00000620.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G48030.20mitochondrial lipoamide dehydrogenase 1
NRP31023.20RecName: Full=Dihydrolipoyl dehydrogenase, mitochondrial; AltName: Full=Dihydrolipoamide dehydrogenase; AltName: Full=Glycine cleavage system L protein; AltName: Full=Pyruvate dehydrogenase complex E3 subunit; Short=E3; Short=PDC-E3; Flags: Precursor [Pisum sativum]
COGYP_001526925.10dihydrolipoamide dehydrogenase [Azorhizobium caulinodans ORS 571]
Swissprottr|P31023|DLDH_PEA0Dihydrolipoyl dehydrogenase, mitochondrial (Precursor)
trEMBLtr|A0A072V2R0|A0A072V2R0_MEDTR0Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00012634765637625+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K00382DLD, lpd, pdhDEC:1.8.1.4Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
Glyoxylate and dicarboxylate metabolismmap00630
Propanoate metabolismmap00640
Glycine, serine and threonine metabolismmap00260
Valine, leucine and isoleucine degradationmap00280


Gene Ontology

biological_process

GO:0045454  cell redox homeostasis

GO:0055114  oxidation-reduction process


molecular_function

GO:0004148  dihydrolipoyl dehydrogenase activity

GO:0016491  oxidoreductase activity

GO:0016668  oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor

GO:0050660  flavin adenine dinucleotide binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000012s00000620.1PF07992.9Pyr_redox_2413531.30E-45
Glyur000012s00000620.1PF00070.22Pyr_redox2122875.70E-22
Glyur000012s00000620.1PF02852.17Pyr_redox_dim3844936.60E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control60.036
SRR1783600control60.327
SRR1783602moderate drought stress38.300
SRR1811619moderate drought stress37.871

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain70.997
DRR006520Root Summer glycyrrhizin high producing strain70.432
DRR006521Root Winter glycyrrhizin high producing strain86.782
DRR006522Root Winter glycyrrhizin high producing strain84.562
DRR006523Root Summer glycyrrhizin low producing strain58.938
DRR006524Root Summer glycyrrhizin low producing strain58.999
DRR006525Leaf Summer glycyrrhizin high producing strain234.263
DRR006526Leaf Summer glycyrrhizin high producing strain233.316

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)194.407
SRR2868004Drought Stress (root)193.512
SRR2967015Control (root)146.549

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf189.288
SRR9715740Leaf206.416
SRR9715741Leaf147.660
SRR9715739Root83.355
SRR9715742Root117.544
SRR9715743Root111.805

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h77.967
SRR8749028MeJA induced 9h100.018
SRR8749029MeJA induced 9h71.420
SRR8749030Uninduced169.168
SRR8749031Uninduced138.752
SRR8749032Uninduced108.814

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root135.885
SRR8400027Control - Root138.128

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved