Gene detail information of Glyur000012s00000604 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17350.1 | 2.00E-92 | |
| NR | KHN03247.1 | 8.40E-175 | hypothetical protein glysoja_004273 [Glycine soja] |
| trEMBL | tr|I1MRW3|I1MRW3_SOYBN | 3.00E-175 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G04290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 521184 | 522811 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000012s00000604.1 | PF13947.1 | GUB_WAK_bind | 29 | 128 | 5.40E-15 |
| Glyur000012s00000604.1 | PF14380.1 | WAK_assoc | 218 | 254 | 1.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 58.240 |
| SRR1783600 | control | 58.159 |
| SRR1783602 | moderate drought stress | 15.490 |
| SRR1811619 | moderate drought stress | 15.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.865 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.664 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.255 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.662 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.478 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.317 |
| SRR2868004 | Drought Stress (root) | 5.783 |
| SRR2967015 | Control (root) | 6.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.948 |
| SRR9715740 | Leaf | 0.800 |
| SRR9715741 | Leaf | 0.624 |
| SRR9715739 | Root | 21.647 |
| SRR9715742 | Root | 11.492 |
| SRR9715743 | Root | 13.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 67.195 |
| SRR8749028 | MeJA induced 9h | 15.583 |
| SRR8749029 | MeJA induced 9h | 18.446 |
| SRR8749030 | Uninduced | 1.296 |
| SRR8749031 | Uninduced | 0.162 |
| SRR8749032 | Uninduced | 0.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.330 |
| SRR8400027 | Control - Root | 35.765 |