Gene detail information of Glyur000012s00000600 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17360.1 | 0 | phragmoplast orienting kinesin 1 |
| NR | KHN03246.1 | 0 | Kinesin-like protein KIF15 [Glycine soja] |
| Swissprot | tr|Q27IK7|POK1_ARATH | 0 | Phragmoplast orienting kinesin-1 |
| trEMBL | tr|K7MJU4|K7MJU4_SOYBN | 0 | Kinesin-like protein {ECO:0000256|RuleBase:RU000394} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 484748 | 498070 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000012s00000600.1 | PF00225.18 | Kinesin | 137 | 468 | 1.50E-107 |
| Glyur000012s00000600.1 | PF12711.2 | Kinesin-relat_1 | 614 | 698 | 3.60E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.086 |
| SRR1783600 | control | 1.054 |
| SRR1783602 | moderate drought stress | 1.207 |
| SRR1811619 | moderate drought stress | 1.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.870 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.833 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.909 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.904 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.845 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.072 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.775 |
| SRR2868004 | Drought Stress (root) | 3.235 |
| SRR2967015 | Control (root) | 3.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.776 |
| SRR9715740 | Leaf | 4.642 |
| SRR9715741 | Leaf | 0.726 |
| SRR9715739 | Root | 1.088 |
| SRR9715742 | Root | 0.354 |
| SRR9715743 | Root | 0.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.189 |
| SRR8749028 | MeJA induced 9h | 1.194 |
| SRR8749029 | MeJA induced 9h | 0.746 |
| SRR8749030 | Uninduced | 0.165 |
| SRR8749031 | Uninduced | 0.115 |
| SRR8749032 | Uninduced | 0.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.411 |
| SRR8400027 | Control - Root | 3.601 |