Gene detail information of Glyur000012s00000588 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 408146 | 410385 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000012s00000588.1 | PF13456.1 | RVT_3 | 1 | 76 | 7.70E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.617 |
| SRR1783600 | control | 8.054 |
| SRR1783602 | moderate drought stress | 15.663 |
| SRR1811619 | moderate drought stress | 15.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.920 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.993 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.757 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.522 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.581 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.018 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.743 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.374 |
| SRR2868004 | Drought Stress (root) | 2.573 |
| SRR2967015 | Control (root) | 2.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.350 |
| SRR9715740 | Leaf | 0.699 |
| SRR9715741 | Leaf | 0.361 |
| SRR9715739 | Root | 0.635 |
| SRR9715742 | Root | 0.702 |
| SRR9715743 | Root | 0.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.410 |
| SRR8749028 | MeJA induced 9h | 2.285 |
| SRR8749029 | MeJA induced 9h | 0.286 |
| SRR8749030 | Uninduced | 0.934 |
| SRR8749031 | Uninduced | 0.399 |
| SRR8749032 | Uninduced | 0.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.550 |
| SRR8400027 | Control - Root | 2.889 |