Gene detail information of Glyur000012s00000579 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17430.1 | 1.00E-112 | Nucleotide-sugar transporter family protein |
| NR | XP_003546547.1 | 1.03E-178 | PREDICTED: probable sugar phosphate/phosphate translocator At3g17430-like [Glycine max] |
| Swissprot | tr|Q9LRP2|PT317_ARATH | 1.00E-143 | Probable sugar phosphate/phosphate translocator At3g17430 |
| trEMBL | tr|I1MHQ0|I1MHQ0_SOYBN | 4.00E-179 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G21500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 378386 | 383162 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000012s00000579.1 | PF03151.11 | TPT | 175 | 227 | 4.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.060 |
| SRR1783600 | control | 13.087 |
| SRR1783602 | moderate drought stress | 9.311 |
| SRR1811619 | moderate drought stress | 9.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.624 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.977 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.749 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.887 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.376 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.484 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.955 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.551 |
| SRR2868004 | Drought Stress (root) | 26.630 |
| SRR2967015 | Control (root) | 24.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.987 |
| SRR9715740 | Leaf | 10.730 |
| SRR9715741 | Leaf | 13.420 |
| SRR9715739 | Root | 8.077 |
| SRR9715742 | Root | 13.526 |
| SRR9715743 | Root | 11.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.230 |
| SRR8749028 | MeJA induced 9h | 10.609 |
| SRR8749029 | MeJA induced 9h | 4.549 |
| SRR8749030 | Uninduced | 4.777 |
| SRR8749031 | Uninduced | 2.995 |
| SRR8749032 | Uninduced | 2.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.392 |
| SRR8400027 | Control - Root | 23.493 |