Gene detail information of Glyur000012s00000567 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G44310.1 | 8.00E-10 | Late embryogenesis abundant protein (LEA) family protein |
| NR | KHN03228.1 | 5.03E-95 | Late embryogenesis abundant protein D-29 [Glycine soja] |
| Swissprot | tr|P13940|LEA29_GOSHI | 7.00E-25 | Late embryogenesis abundant protein D-29 |
| trEMBL | tr|Q39801|Q39801_SOYBN | 5.00E-93 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G17980.1} (Precursor) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 332384 | 334353 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.740 |
| SRR1783600 | control | 0.768 |
| SRR1783602 | moderate drought stress | 4.690 |
| SRR1811619 | moderate drought stress | 4.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 50.107 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 49.767 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2491.324 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2417.855 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.507 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.381 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.729 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.222 |
| SRR2868004 | Drought Stress (root) | 4.210 |
| SRR2967015 | Control (root) | 11.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.683 |
| SRR9715740 | Leaf | 1.680 |
| SRR9715741 | Leaf | 1.508 |
| SRR9715739 | Root | 6.905 |
| SRR9715742 | Root | 15.102 |
| SRR9715743 | Root | 13.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.460 |
| SRR8749028 | MeJA induced 9h | 0.461 |
| SRR8749029 | MeJA induced 9h | 0.368 |
| SRR8749030 | Uninduced | 0.248 |
| SRR8749031 | Uninduced | 0.253 |
| SRR8749032 | Uninduced | 0.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.131 |
| SRR8400027 | Control - Root | 6.913 |