Gene detail information of Glyur000012s00000559 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48300.1 | 1.00E-20 | |
| NR | AFK37850.1 | 1.96E-111 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SC58|I3SC58_LOTJA | 7.00E-112 | Uncharacterized protein {ECO:0000313|EMBL:AFK37850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 263679 | 265255 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.328 |
| SRR1783600 | control | 24.614 |
| SRR1783602 | moderate drought stress | 70.086 |
| SRR1811619 | moderate drought stress | 69.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 174.090 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 172.675 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 72.016 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 70.625 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 260.412 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 259.272 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 61.719 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 61.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 100.943 |
| SRR2868004 | Drought Stress (root) | 199.440 |
| SRR2967015 | Control (root) | 272.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 60.258 |
| SRR9715740 | Leaf | 97.162 |
| SRR9715741 | Leaf | 104.327 |
| SRR9715739 | Root | 138.031 |
| SRR9715742 | Root | 77.563 |
| SRR9715743 | Root | 91.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.992 |
| SRR8749028 | MeJA induced 9h | 102.730 |
| SRR8749029 | MeJA induced 9h | 40.193 |
| SRR8749030 | Uninduced | 27.277 |
| SRR8749031 | Uninduced | 38.919 |
| SRR8749032 | Uninduced | 40.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 102.210 |
| SRR8400027 | Control - Root | 63.873 |