Gene detail information of Glyur000012s00000545.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17600.1 | 3.00E-32 | indole-3-acetic acid inducible 31 |
| NR | KHN45021.1 | 3.52E-102 | Auxin-responsive protein IAA31 [Glycine soja] |
| Swissprot | tr|Q8H174|IAA31_ARATH | 2.00E-39 | Auxin-responsive protein IAA31 |
| trEMBL | tr|I1LYD6|I1LYD6_SOYBN | 3.00E-102 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 200209 | 201280 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AUX/IAA |
| EAR motif-containing Proteins | AUX/IAA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000012s00000545.1 | PF02309.11 | AUX_IAA | 69 | 194 | 5.70E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.889 |
| SRR1783600 | control | 0.775 |
| SRR1783602 | moderate drought stress | 1.572 |
| SRR1811619 | moderate drought stress | 1.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.358 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.584 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.609 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.502 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.676 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.720 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.362 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.879 |
| SRR2868004 | Drought Stress (root) | 1.176 |
| SRR2967015 | Control (root) | 0.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.595 |
| SRR9715740 | Leaf | 0.772 |
| SRR9715741 | Leaf | 0.405 |
| SRR9715739 | Root | 0.831 |
| SRR9715742 | Root | 1.073 |
| SRR9715743 | Root | 1.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.013 |
| SRR8749028 | MeJA induced 9h | 145.886 |
| SRR8749029 | MeJA induced 9h | 125.684 |
| SRR8749030 | Uninduced | 64.155 |
| SRR8749031 | Uninduced | 108.901 |
| SRR8749032 | Uninduced | 167.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.612 |
| SRR8400027 | Control - Root | 1.679 |