Gene detail information of Glyur000012s00000539 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17250.1 | 0 | Alkaline-phosphatase-like family protein |
| NR | XP_004508065.1 | 0 | PREDICTED: GPI ethanolamine phosphate transferase 3-like isoform X2 [Cicer arietinum] |
| COG | YP_226694.1 | 7.00E-06 | hypothetical protein cg2693 [Corynebacterium glutamicum ATCC 13032] |
| trEMBL | tr|A0A072URI9|A0A072URI9_MEDTR | 0 | Alkaline-phosphatase-like protein {ECO:0000313|EMBL:KEH32399.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 162445 | 169338 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000012s00000539.1 | PF01663.17 | Phosphodiest | 215 | 286 | 2.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.975 |
| SRR1783600 | control | 8.987 |
| SRR1783602 | moderate drought stress | 13.262 |
| SRR1811619 | moderate drought stress | 13.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.294 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.387 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.523 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.664 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.485 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.152 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.086 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.659 |
| SRR2868004 | Drought Stress (root) | 18.807 |
| SRR2967015 | Control (root) | 15.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.113 |
| SRR9715740 | Leaf | 7.218 |
| SRR9715741 | Leaf | 7.391 |
| SRR9715739 | Root | 3.958 |
| SRR9715742 | Root | 7.760 |
| SRR9715743 | Root | 7.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.105 |
| SRR8749028 | MeJA induced 9h | 6.906 |
| SRR8749029 | MeJA induced 9h | 2.877 |
| SRR8749030 | Uninduced | 3.399 |
| SRR8749031 | Uninduced | 1.119 |
| SRR8749032 | Uninduced | 1.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.577 |
| SRR8400027 | Control - Root | 18.090 |