Gene detail information of Glyur000012s00000529 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33140.1 | 1.00E-93 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| NR | XP_003541321.2 | 0 | PREDICTED: uncharacterized protein LOC100793947 [Glycine max] |
| trEMBL | tr|K7LZ51|K7LZ51_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G17591.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 81896 | 86214 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000012s00000529.1 | PF06941.7 | NT5C | 161 | 359 | 4.60E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.106 |
| SRR1783600 | control | 6.226 |
| SRR1783602 | moderate drought stress | 6.676 |
| SRR1811619 | moderate drought stress | 6.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.089 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.299 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.555 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.734 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.363 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.026 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.915 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.387 |
| SRR2868004 | Drought Stress (root) | 23.748 |
| SRR2967015 | Control (root) | 24.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.658 |
| SRR9715740 | Leaf | 21.615 |
| SRR9715741 | Leaf | 23.701 |
| SRR9715739 | Root | 2.861 |
| SRR9715742 | Root | 11.505 |
| SRR9715743 | Root | 8.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.209 |
| SRR8749028 | MeJA induced 9h | 4.243 |
| SRR8749029 | MeJA induced 9h | 3.198 |
| SRR8749030 | Uninduced | 7.210 |
| SRR8749031 | Uninduced | 3.092 |
| SRR8749032 | Uninduced | 3.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.124 |
| SRR8400027 | Control - Root | 22.875 |