Gene detail information of Glyur000012s00000521 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73430.2 | 8.00E-29 | sec34-like family protein |
| NR | XP_004508048.1 | 3.40E-51 | PREDICTED: conserved oligomeric Golgi complex subunit 3-like [Cicer arietinum] |
| trEMBL | tr|V7CB82|V7CB82_PHAVU | 6.00E-49 | Uncharacterized protein {ECO:0000313|EMBL:ESW26530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 35103 | 36169 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.344 |
| SRR1783600 | control | 18.828 |
| SRR1783602 | moderate drought stress | 21.316 |
| SRR1811619 | moderate drought stress | 20.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.392 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.219 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.721 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.136 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.484 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.706 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.109 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.408 |
| SRR2868004 | Drought Stress (root) | 29.917 |
| SRR2967015 | Control (root) | 34.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.187 |
| SRR9715740 | Leaf | 5.268 |
| SRR9715741 | Leaf | 9.003 |
| SRR9715739 | Root | 1.229 |
| SRR9715742 | Root | 12.314 |
| SRR9715743 | Root | 9.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.956 |
| SRR8749028 | MeJA induced 9h | 33.914 |
| SRR8749029 | MeJA induced 9h | 8.718 |
| SRR8749030 | Uninduced | 8.695 |
| SRR8749031 | Uninduced | 9.320 |
| SRR8749032 | Uninduced | 3.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.245 |
| SRR8400027 | Control - Root | 39.629 |