Gene detail information of Glyur000011s00000737 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75150.1 | 3.00E-56 | |
| NR | XP_004501028.1 | 0 | PREDICTED: calponin homology domain-containing protein DDB_G0272472-like [Cicer arietinum] |
| trEMBL | tr|A0A072VD92|A0A072VD92_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH36145.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 677803 | 681850 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.139 |
| SRR1783600 | control | 5.859 |
| SRR1783602 | moderate drought stress | 3.333 |
| SRR1811619 | moderate drought stress | 3.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.991 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.543 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.493 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.386 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.031 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.016 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.753 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.849 |
| SRR2868004 | Drought Stress (root) | 7.185 |
| SRR2967015 | Control (root) | 8.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.054 |
| SRR9715740 | Leaf | 0.536 |
| SRR9715741 | Leaf | 1.312 |
| SRR9715739 | Root | 0.163 |
| SRR9715742 | Root | 1.166 |
| SRR9715743 | Root | 0.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.108 |
| SRR8749028 | MeJA induced 9h | 13.132 |
| SRR8749029 | MeJA induced 9h | 8.570 |
| SRR8749030 | Uninduced | 1.616 |
| SRR8749031 | Uninduced | 1.792 |
| SRR8749032 | Uninduced | 1.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.887 |
| SRR8400027 | Control - Root | 9.174 |