Gene detail information of Glyur000011s00000720 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47550.1 | 4.00E-10 | Cystatin/monellin superfamily protein |
| NR | AFK36154.1 | 1.65E-15 | unknown [Lotus japonicus] |
| Swissprot | tr|Q41916|CYT5_ARATH | 3.00E-12 | Cysteine proteinase inhibitor 5 (Precursor) |
| trEMBL | tr|I3S7B2|I3S7B2_LOTJA | 6.00E-16 | Uncharacterized protein {ECO:0000313|EMBL:AFK36154.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 568217 | 568696 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000011s00000720.1 | PF00031.16 | Cystatin | 79 | 129 | 1.10E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.148 |
| SRR1783600 | control | 4.311 |
| SRR1783602 | moderate drought stress | 3.423 |
| SRR1811619 | moderate drought stress | 3.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.202 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.061 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.930 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.582 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.470 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.461 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.018 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.087 |
| SRR2868004 | Drought Stress (root) | 1.451 |
| SRR2967015 | Control (root) | 1.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.085 |
| SRR9715741 | Leaf | 0.140 |
| SRR9715739 | Root | 12.497 |
| SRR9715742 | Root | 3.498 |
| SRR9715743 | Root | 5.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.771 |
| SRR8749028 | MeJA induced 9h | 0.477 |
| SRR8749029 | MeJA induced 9h | 0.442 |
| SRR8749030 | Uninduced | 0.108 |
| SRR8749031 | Uninduced | 0.146 |
| SRR8749032 | Uninduced | 0.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.509 |
| SRR8400027 | Control - Root | 10.294 |