Gene detail

Gene detail information of Glyur000011s00000718.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G23450.2	8.00E-175	Protein kinase superfamily protein
NR	AES73970.2	0	wall associated kinase-like protein [Medicago truncatula]
COG	YP_284821.1	6.00E-23	protein kinase:GAF [Dechloromonas aromatica RCB]
Swissprot	tr\|Q8RY67\|WAKLO_ARATH	0	Wall-associated receptor kinase-like 14 (Precursor)
trEMBL	tr\|G7J4M9\|G7J4M9_MEDTR	0	Wall associated kinase-like protein {ECO:0000313\|EMBL:AES73970.2}

Sequence

Transcript Sequence

>Glyur000011s00000718.1
CATCGATAATTTTCCTTTTTCCACCTCCTGAATCAGACTTCTTAACGGATGTTGTTTCTCTCCTCCACACGTTTCCCCAATCGAAAACCCCATTCCTCAATCAATCCTCATCTAGAAAATCACATGCCAATTTCCGATCCTAATCATCCACAAAAGTCTCGCCGACTCTGATCCTTGATCTCTTCCCTTAAGTCACACCCCACTCCTCTGTATCTAGTCAACCAGCAACAAAAGCTTGTCTCTTTTTCTCTTCTCTCTGTTCCCTCTGTCTCCTTTATTATTTTCCCCCTTCATAAATAATGAGAAACCCTTTTCCTTAGAAAATCTCTGCCATGATCAACAAACACCCACTTCTAATCCTTTTAGTTTTTTCAGGTGTATCAAACTTCCTCCCCATAACCACATCCCAAGTAAACTACCGCGAGTGCCACCAAACATGCGGTTCAGCCAAACCCTTCCCTTACCCTTTTGGATTCTCCTCCGGTTGCGCAATCCGCCTCAACTGCACCCCCGACGGCNGAGCCTCCGTCGGTGAATTCCCCGTCCACTCTGTAAGCTCAGACAGCATAATAGTGAGCATCGAGGCCCAATGCAATCGCCCATTTGAGAGCTTCCNCCAACTCTTCAGCCACAAATACGCACCCACTTCTGGAAACGTGATTCTCTTACAGAACTGCACAGAAACGTTCTTGCCCTGCTCCATACCGGAGACTCTGCTTCCGACACAGTTNGACTCCGAGGGTTGCAACAGCTCCTCCGGCAGANTGAGCTGCTACTTCGAGNACAGAACGAGGGGTTTCGTGAGTGACCNNGAATTGGACCGAATTGGGTGCAAGTACTTTACATCGTCGATTTCTTNCGATGATTTGAGAAACACTTCCGGTGCGGCGGTGTCGTTGGAAGTGGCTACGATTGANCTTGGATGGTGGATTCACGGGGATCAATGTCTCTGTTCTGATCATGCCAATTGCACCAAACTTCAGTCGCCAATTGATGGAAAGCCTGGGTTTCGGTGTCGCTGCAACGAAGGGTTTGTCGGCGATGGATTTTTGGCCGGCACAGGCTGCCGGAAAGCCCCATCAACATGCAGCCCAGCAAAGTACATGTCCGGACGATGCGGAGGATCAGCAAGATTTATTGTCTTAATTGGAGGATTTGTTTTCGGTGTGTCATTGATGATTACCCTGGGTTCAATATGNTGCTTCTTTCGGCGGCGCTCCAAATTGAGAGTCACAAAGAGCACGAAAAGGCGCTTCACCGAAGCCACTACCAATTACAGCGTCCCCATCTATCCCTACAAGGACATCGAGAGAGCCACGAATAGCTTCTCAGAGAAACAGAGGCTAGGAACCGGGGCATACGGGACGGTCTATGCCGGAAAGCTTTTCAACGACGAATGGGTTGCCATCAAGAGGATAAAGCACAGAGACACAGAGAGCATTGAGCAAGTGATGAACGAGATCAGGCTCCTTTCCTCTGTGAGCCACCCCAATTTAGTGCGCTTGTTGGGTTGCTCCATTGAATACGGAGAACAAATACTTGTGTACGAGTTCATGCCCAATGGAACACTGAGCCAGCATTTACAAAGGGAGAGAGGGAACGGGCTTACATGGCCCGTTAGACTCACAATTGCAACCGAAACAGCACAAGCCATAGCACATCTTCATTCAACTATTAATCCCCCAATTTACCACAGAGACATCAAGTCAAGCAACATACTCTTGGACTGCGATTTTGGATCCAAGGTAGCAGATTTTGGGCTTTCTAGACTTGGAATGACCGAAATATCCCACATTTCAACTGCCCCACAGGGTACCCCTGGCTACGTGGACCCACAGTACCATCAGGACTTTCACCTCTCTGATAAGAGTGACGTGTACAGCTTCGGTGTTGTTCTTGTTGAGATCATAACGGGGTTGAAAGTGGTGGACTTTTCTCGTCCTCACAATGAGGTGAATCTTGCTTCTCTTGCTGTGGACAGGATTGGGAAAGGGCTTTTGGACGAGATNATAGACCCATTTCTCCTTGATCCCCACGAAACAACCACCCTATCCTCCATACACAAGGTTGCTGAGGTGGCATTCAGGTGCCTTGCGTTTCACAGGGACATGAGGCCNTCGATGACAGAAGTGGCAACTGAGTTGGAGCAGCTCAGGACGAATTTCGGAGAAAACAATTGTACAGCTTCAACGGAGTTGTCTTCTTGCTCCTCCTNTGGCGAAAGTGAGAAGCCACTGACGGGGAAGAAGGTTGGGCCTAAGGGTAATGGGCATCTTAAGCTGCAGACTGGGCCCGTTTCTTTTAAGTCAATGGAGAGGCCCAAAAGTAGCTCACCGGTCTCGGTGCAAGACCCAGACCCGTGGTTCAGTGAACACAGCTCCCCTTCGTCTAGTAGTTTCCCCAGTAAGTCATTTGATTAAGAAGCCAAGACAACTAGCTCTCTGTTTCATCAATTAGTANGTGGTTTGCTTGTAAATCTTTTTATTTATCTCAATGACCTCGAAGGAGGCAAACAAAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00011	560154	565330	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000011s00000718.1	PF00069.20	Pkinase	333	600	1.80E-43

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	45.261
SRR1783600	control	45.375
SRR1783602	moderate drought stress	18.315
SRR1811619	moderate drought stress	18.026

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	32.833
DRR006520	Root Summer glycyrrhizin high producing strain	32.033
DRR006521	Root Winter glycyrrhizin high producing strain	4.882
DRR006522	Root Winter glycyrrhizin high producing strain	4.571
DRR006523	Root Summer glycyrrhizin low producing strain	29.622
DRR006524	Root Summer glycyrrhizin low producing strain	29.475
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.617
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.109

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	56.164
SRR2868004	Drought Stress (root)	49.775
SRR2967015	Control (root)	49.166

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.722
SRR9715740	Leaf	4.980
SRR9715741	Leaf	5.763
SRR9715739	Root	26.831
SRR9715742	Root	33.336
SRR9715743	Root	29.393

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	43.350
SRR8749028	MeJA induced 9h	38.180
SRR8749029	MeJA induced 9h	35.303
SRR8749030	Uninduced	20.721
SRR8749031	Uninduced	16.474
SRR8749032	Uninduced	15.231

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	54.709
SRR8400027	Control - Root	58.814