Gene detail

Gene detail information of Glyur000011s00000707

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G64460.8	7.00E-120	Phosphoglycerate mutase family protein
NR	XP_004501059.1	0	PREDICTED: uncharacterized protein LOC101489637 [Cicer arietinum]
COG	YP_004691572.1	3.00E-12	phosphoglycerate mutase family protein [Roseobacter litoralis Och 149]
Swissprot	tr\|Q9FGF0\|PGML1_ARATH	7.00E-150	Phosphoglycerate mutase-like protein 1 {ECO:0000305}
trEMBL	tr\|I1JV19\|I1JV19_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G09590.1}

Sequence

Transcript Sequence

>Glyur000011s00000707.1
GGAGAGTCTCATGTGGCATGTACGAAGGAATGAAGGATAAGCAGCCAAACACTCAGCTCTTCACGTTGCGTCTGGGGTGCTGCCAGATTCAGACCAAATCACAAAGCAATCCCACCCATAAGGGAGAGAGAACAATTATCAAAGTTGTTGATATTATTATTATTATTATTTCGAATTATATATTTTAATCTTCTCTTACGCCATGCCCATTACTCTTCTTACACATGACCCTATTTTGTTGAAGAATTTCACTTTTGTCCCCACTCCCATTTCAGAGCCTCGCCGCGCATCCCAACGTTCTCCTCGTTTACTTTGCCTCTCTTCTCCTCGATCAGATATGGATACTGGCCCTGGTCAAGGTCTTTACCCATTGCACCGTTGTAAAACTATTCACCTGGTTAGGCATGCCCAAGGGTTCCACAATGTAGAAGGAGACAAGAACCCTGAAGCATACTTATCTTATGATCTTTTTGATGCAAGCCTGACCCCTCTTGGCTGGAAGCAGGTTGATAATCTGAGAGAGCATGTTAAGACAAACGGTCCTCCCAAAAAAATTGAACTAGTTATTGTTTCCCCCTTGTTAAGGACCATGCAAACAGCGGTTGGAGTTTTTGGTGGTGAAGCATACACTGATGGGATTGATGCCCCTCCTCTGATGAATGACAATGTGGGGAATGGTAGTCGTCCTGCAATTTCTAGCCTGAATTCCCCACCATTTGTAGCAGTAGAGCTTTGCCGAGAGCATTTGGGGGTGCATCCTTGTGATAAGAGAAGAAGCATCACTGAGTACCGAAATATGTTTCCAGCAATTGATTTTTCACTGATAGAAAGTGATGAAGACATTTATTGGAAACCCGACATTAGAGAAAAGAATGAAGAAGTTGCTGCCAGGGGACTGAAATTTTTGGAATGGTTGTGGACACGTAAAGAAAAGGAGATGGCTGTTGTTACCCACAGTGGTTTTCTGTTTCATACTCTAAGTGCTTTTGGAAATGATTGTCATCCAACTGTGAAGAGTGAAATCTGCACACACTTCGCTAATTGTGAGCTGCGTTCAATGGTTATCGTTGATAGAGGAATGATTGGATCAGACGAGTCCTCCACCAACTATCCTGGCAAAATTCCACATGGCCTTGACCTTCCAAGTGATGTTGCTGACGAGAAACATGCAGCAGGGAATGGGCCAGCAAAGTAACAGCTGATAACTGGCTAGCAATCTGTTACATGATGGGATTTTCTTCGGTTATATGATTTTCCTAATGTCAACCTTTTTCAGATGGATAGCGACAACGATTACTCCAATTTAGCATTCATTAATGACTATCAATTTTATATGTGAACAAAAGGCAATTGAAGTCCGATTCGTGGTAGAATAGACTTAAGATTGTTGATTGAGAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00011	485793	490383	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000011s00000707.1	PF00300.17	His_Phos_1	62	255	8.70E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.843
SRR1783600	control	4.623
SRR1783602	moderate drought stress	4.145
SRR1811619	moderate drought stress	4.119

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.239
DRR006520	Root Summer glycyrrhizin high producing strain	7.211
DRR006521	Root Winter glycyrrhizin high producing strain	11.996
DRR006522	Root Winter glycyrrhizin high producing strain	11.557
DRR006523	Root Summer glycyrrhizin low producing strain	7.561
DRR006524	Root Summer glycyrrhizin low producing strain	7.546
DRR006525	Leaf Summer glycyrrhizin high producing strain	27.803
DRR006526	Leaf Summer glycyrrhizin high producing strain	27.634

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.968
SRR2868004	Drought Stress (root)	20.741
SRR2967015	Control (root)	20.247

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	24.304
SRR9715740	Leaf	31.380
SRR9715741	Leaf	18.633
SRR9715739	Root	2.267
SRR9715742	Root	4.145
SRR9715743	Root	4.564

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.416
SRR8749028	MeJA induced 9h	16.961
SRR8749029	MeJA induced 9h	11.538
SRR8749030	Uninduced	16.757
SRR8749031	Uninduced	10.154
SRR8749032	Uninduced	11.715

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.289
SRR8400027	Control - Root	22.288