Gene detail

Gene detail information of Glyur000011s00000681.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G09970.1	0	Leucine-rich receptor-like protein kinase family protein
NR	XP_003526519.1	0	PREDICTED: receptor-like protein kinase HAIKU2-like [Glycine max]
COG	YP_004775215.1	7.00E-51	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q9LJM4\|IKU2_ARATH	0	Receptor-like protein kinase HAIKU2 (Precursor)
trEMBL	tr\|I1K9J9\|I1K9J9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G09520.1}

Sequence

Transcript Sequence

>Glyur000011s00000681.1
ATGTTCGCCGCCTTCCCTTCCCCGCGAGTCCTTCTTCTTCTCTTCTTCCCATTCCTCTCACTCCTAATAACCGGAGTCAAATCCGACGAGAGTCAAATCCTACTTCACCTAAAATCCTCCCTCGAGAAATCAAATTCCAAGCTCTTTGACTCATGGAATGCCACCAATTCCATATGCAGTTTCCACNGAGTGACCTGCAACTCCATGGGTTCCGTCACCGAAATCGACCTCTCCCACCAAAATCTATTCGGGTCTCTCCCTCTGGACTCTCTCTGCCAGCTCAAATCACTGGAGAAGCTGGTGTTGGGATTTAACAATTTGTATGGGAAAGTCACAGAGGACCTCAGAAACTGCGTCAAGTTAAACTTCTTGGACTTGGGGAACAACTTTTTCTCTGGAACTTTCCCAGATATATCCCCTCTCCACAACTTGCAGTACCTTTTCTTGAACAAAAGTGGATTTTCTGGAACTTTCCCCTGGCAGTCCCTGTTGAACATGACGGGTCTTTTGCAATTAAGCGTTGGAGACAACCCTTTCGACCTCACGCCTTTCCCCAAAGAGGTTTTGAGCCTCAAGCAACTGAATTGGCTATNCCTGACGAATTGCACCCTGGGAGGGAACTTACCGGTTGGGATCGGTAACCTGACGGAGCTCACGGAGCTAGAATTCTCCGATAATTTCATCACCGGCGAGTTGCCGGCTGAGATTGGGAACCTTCGGAAGCTGTGGCAGTTTGAATTCTACAACAACTCTTTCACTGGGAAGATCCCAAGCGCGTGGAGGAACCTCACGGGGCTTAGCTATTTCGACGGGTCAATGAATCGATTGGAAGGGGATCTCTCTGTGGTGAGGTTCATGACCAACCTGAAGTCGCTTCAGTTTTTCGAGAACGAGATTTCCGGTGAAATCCCACCGGAGCTTGGCGAGTTCAAACGCCTCGAGGGTTTGTCTCTGTATAGGAACAGGTTGACGGGTCCTATTCCTCAGAAGATTGGTTCCTGGTCGGATTTCAGTTTCATCGACGTGTCGGAGAATTTCTTGACGGGTCCTATTCCTCCTGACATGTGCAAAGGGGGAAAGATGGACGGGCTTCTCGTGCTTCAGAACAACCTCACCGGCGAGATTCCGGCCACCTATGGAAACTGCTTGACTCTGAAAAGATTCAGGGTAAGCAGAAACTCGCTCTCGGGTGTTGTTCCCCCTTCGATATGGGGATTGCCCAACACTGAAATAATCGATATTGAACTGAACCAGTTGGAAGGTTCGGTTACTTCGGATATCCACAAGGCGAAAACACTTGCCAGTATATTCGCGAGAAGTAACCGTTTGTCCGGTGAATTACCGGAAGAGATATCAAAAGCGACGTCGTTGGTGAGCATCGACCTTAGCGAGAATCAAGTTTCAGGGAACATTCCAGAAACGATCGGCNAGCTGAAACAACTGGGTAGCCTTCATTTACAGAGCAACAAGTTATCGGGTTCAATACCAGACTCTTTAGGTTCGTGTAACTCCCTAAACGACGTCGATTTATCAGGGAATTCCCTCTCCGGTNAAATCCCCTCGTCGTTGGGGTCCTTGCCGGCTCTGAACTCTCTGAATTTCTCCCGNAACGAACTCTCCGGCGAAATCCCGGGGATCTTAGCGTCCCTCAGGCTAAGCCTCTTTGACCTGTCACATAACCGGTTAACCGGTAAAATACCGGAGGCTCTAACAATTCAAGCCTACAACGGAAGCCTCACCGGAAACCCCGGTCTCTGCACCCTCGACGCTATTGGCTCCTTCCCTCGCTGCTCTGCCTCTTCTAGCATGTCAAAAGACGTTCGTACCCTTCTCATGTGCCTCGCAATAGCCTTGGTCTTAATCCTCTCTTGTCTGGGCGTGTATTTGCGCTTGAAGAGGAAGNAGGAGGAGAAAGAGGGTAAATATGGAAGAGAGCGTTCCCTGAAGGAAGAATCCTGGGATGTTAAATCCTTCCACGTGCTGAGTTTCACGGAGGACGAGATTCTTGATTCCATCAAGCAGGAGAATCTCATAGGGAAAGGGGGTTCGGGGAACGTGTACAGGGTTACGCTCGCAAACGGGAAGGAACTCGCCGTGAAGCATATCTGGAACACCGAAAACATCGCCGCCGCCGGCGGGAAGAGGTCGTCGTGGAGCAGCACTCCAATGCTGGCGAGGCGCGGCGGTAGCGGCGGAGGGGGGAGGTCACGTGAGTTCGACGCGGAGGTGCAGGCGTTGAGTTCCATAAGGCACGTGAACGTNGTGAAGCTGTACTGCAGCATCACGAGTGAGGATTCGAGTCTTTTGGTGTATGAGTATTTGCCGAATGGGAGTTTGTGGGATAGGCTTCACACGTGCGGGAAGATGGAGCTGGATTGGGAGAGCAGGTATGAGATCGCGGTTGGGGCTGCCAAAGGGTTGGAGTATCTGCATCACGGGTGTGAGAGGCCCGTGATTCACAGGGATGTTAAGTCCAAATATGGGTATACTTACAAGGTGAATGAGAAGAGTGATGTGTATAGTTTTGGGGTGGTGTTGATGGAGCTGGTGACTGGTAAGAGGCCAACTGAACCGGAATTTGGAGAAAACAGAGACATAGTGAACTGGGTGCATGGGAAGGCACAGAGCAGGGAGAAGTTCAGGAGTGCGGTGGACACGAGAATCCCAGAGATGTATAAAGAGGAAGCTTGCAAGGTGTTGAGAACTGCGGTTCTGTGCACGGCGACTCTTCCGGCTTTGAGACCAACCATGAGAGCTGTGGTTCAGAAGCTTGAGGATGCTGCGCCTTGTAAATTGGTTGGAATTGTCATTAGCAAAGACGGGAGTACCGGAAAGAAGATAGGAGTTAACGACAAGTGAAATGAAGCTCCTACTATGGGTTCTATTTCACAGTCTCAGTCAACAAGAAGGGGAACCACTTTTGCACTGGTAGTTAACTAGCTATAGATTGTAAATTTTGCAGGAAAGAAGGGAGAATTAATGTAAAATAATGACCATAGGGGAAAAGCNTCTCCACCTAATAATACTCCTAATAAAAAAAAGAAGAATTTTCCCTTTTTCTTACTAGTGAACTGAAACAGTGTTCAAATAATTGAGTTAATCTGGCTACAATCATATGACCCAAAATAAAATCTGACTTCAATCAAAGTACTCTGTGTAAGAATTACGTGACTGGTGGTGGTGGATGATCCTACCGCAAAGTCAAATGCAAACGCAATAATGCAAAGATAATTGTGAGATGTCATGTGAGCAACCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00011	330732	334279	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000011s00000681.1	PF08263.7	LRRNT_2	29	67	2.10E-05
Glyur000011s00000681.1	PF13855.1	LRR_8	504	562	8.00E-07
Glyur000011s00000681.1	PF00069.20	Pkinase	674	825	9.90E-18
Glyur000011s00000681.1	PF07714.12	Pkinase_Tyr	832	924	2.10E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	46.752
SRR1783600	control	45.071
SRR1783602	moderate drought stress	84.657
SRR1811619	moderate drought stress	84.331

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	61.875
DRR006520	Root Summer glycyrrhizin high producing strain	61.041
DRR006521	Root Winter glycyrrhizin high producing strain	32.899
DRR006522	Root Winter glycyrrhizin high producing strain	32.369
DRR006523	Root Summer glycyrrhizin low producing strain	117.006
DRR006524	Root Summer glycyrrhizin low producing strain	116.794
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.472
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.512

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	86.854
SRR2868004	Drought Stress (root)	161.685
SRR2967015	Control (root)	154.766

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	54.652
SRR9715740	Leaf	50.026
SRR9715741	Leaf	109.360
SRR9715739	Root	73.920
SRR9715742	Root	157.270
SRR9715743	Root	140.569

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	54.832
SRR8749028	MeJA induced 9h	90.111
SRR8749029	MeJA induced 9h	96.997
SRR8749030	Uninduced	103.604
SRR8749031	Uninduced	32.988
SRR8749032	Uninduced	69.319

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	89.423
SRR8400027	Control - Root	76.062