Gene detail information of Glyur000011s00000671 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49630.1 | 0 | amino acid permease 6 |
| NR | KHN08198.1 | 0 | Amino acid permease 6 [Glycine soja] |
| Swissprot | tr|P92934|AAP6_ARATH | 0 | Amino acid permease 6 |
| trEMBL | tr|C6THQ4|C6THQ4_SOYBN | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU21356.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 264424 | 268250 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000011s00000671.1 | PF01490.13 | Aa_trans | 31 | 458 | 1.10E-112 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.656 |
| SRR1783600 | control | 25.579 |
| SRR1783602 | moderate drought stress | 27.047 |
| SRR1811619 | moderate drought stress | 26.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.987 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.712 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.902 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.243 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 42.887 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 43.823 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.403 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 117.793 |
| SRR2868004 | Drought Stress (root) | 131.220 |
| SRR2967015 | Control (root) | 73.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.565 |
| SRR9715740 | Leaf | 16.800 |
| SRR9715741 | Leaf | 50.826 |
| SRR9715739 | Root | 9.473 |
| SRR9715742 | Root | 51.744 |
| SRR9715743 | Root | 43.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.226 |
| SRR8400027 | Control - Root | 54.883 |