Gene detail information of Glyur000011s00000658 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37820.1 | 3.00E-12 | |
| NR | XP_007137268.1 | 4.82E-35 | hypothetical protein PHAVU_009G113200g [Phaseolus vulgaris] |
| trEMBL | tr|V7AUD1|V7AUD1_PHAVU | 2.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:ESW09262.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 203687 | 204100 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.136 |
| SRR1783600 | control | 2.221 |
| SRR1783602 | moderate drought stress | 2.523 |
| SRR1811619 | moderate drought stress | 2.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.366 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.707 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.099 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.069 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.867 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.794 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.837 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.198 |
| SRR2868004 | Drought Stress (root) | 2.198 |
| SRR2967015 | Control (root) | 1.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.633 |
| SRR9715740 | Leaf | 22.467 |
| SRR9715741 | Leaf | 17.951 |
| SRR9715739 | Root | 0.059 |
| SRR9715742 | Root | 0.229 |
| SRR9715743 | Root | 0.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 88.543 |
| SRR8749028 | MeJA induced 9h | 79.366 |
| SRR8749029 | MeJA induced 9h | 154.634 |
| SRR8749030 | Uninduced | 111.365 |
| SRR8749031 | Uninduced | 62.088 |
| SRR8749032 | Uninduced | 80.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.598 |
| SRR8400027 | Control - Root | 6.290 |