Gene detail information of Glyur000011s00000657 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37810.1 | 4.00E-15 | |
| NR | XP_004501085.1 | 4.40E-44 | PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2-like [Cicer arietinum] |
| Swissprot | tr|Q9T068|EPFL2_ARATH | 2.00E-19 | MEPFL2 {ECO:0000305} (Precursor) |
| trEMBL | tr|V7AYF0|V7AYF0_PHAVU | 1.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:ESW09261.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 195354 | 196363 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.092 |
| SRR1811619 | moderate drought stress | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.457 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.520 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.258 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.402 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.300 |
| SRR2868004 | Drought Stress (root) | 0.274 |
| SRR2967015 | Control (root) | 0.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.386 |
| SRR9715740 | Leaf | 1.482 |
| SRR9715741 | Leaf | 0.437 |
| SRR9715739 | Root | 0.074 |
| SRR9715742 | Root | 0.031 |
| SRR9715743 | Root | 0.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 47.131 |
| SRR8749028 | MeJA induced 9h | 44.552 |
| SRR8749029 | MeJA induced 9h | 42.335 |
| SRR8749030 | Uninduced | 5.107 |
| SRR8749031 | Uninduced | 3.848 |
| SRR8749032 | Uninduced | 6.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.048 |
| SRR8400027 | Control - Root | 0.262 |