Gene detail information of Glyur000011s00000656 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10040.2 | 2.00E-120 | alpha/beta-Hydrolases superfamily protein |
| NR | KHN08190.1 | 0 | Putative lipase ROG1-like protein [Glycine soja] |
| trEMBL | tr|K7KIZ3|K7KIZ3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G09240.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 185197 | 189416 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000011s00000656.1 | PF05057.9 | DUF676 | 79 | 308 | 1.60E-64 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.803 |
| SRR1783600 | control | 7.064 |
| SRR1783602 | moderate drought stress | 5.900 |
| SRR1811619 | moderate drought stress | 5.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.712 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.721 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.186 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.039 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.538 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.767 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.924 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.726 |
| SRR2868004 | Drought Stress (root) | 19.149 |
| SRR2967015 | Control (root) | 13.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.161 |
| SRR9715740 | Leaf | 10.770 |
| SRR9715741 | Leaf | 17.903 |
| SRR9715739 | Root | 2.639 |
| SRR9715742 | Root | 9.666 |
| SRR9715743 | Root | 8.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.151 |
| SRR8749028 | MeJA induced 9h | 39.792 |
| SRR8749029 | MeJA induced 9h | 48.821 |
| SRR8749030 | Uninduced | 88.543 |
| SRR8749031 | Uninduced | 131.287 |
| SRR8749032 | Uninduced | 116.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.250 |
| SRR8400027 | Control - Root | 14.660 |