Gene detail information of Glyur000011s00000632 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32860.1 | 4.00E-06 | |
| NR | XP_006581454.1 | 2.29E-76 | PREDICTED: uncharacterized protein LOC102666753 [Glycine max] |
| trEMBL | tr|I1K9F8|I1K9F8_SOYBN | 9.00E-77 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G09180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 21905 | 22516 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000011s00000632.1 | PF05553.6 | DUF761 | 178 | 197 | 5.10E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.411 |
| SRR1783600 | control | 0.474 |
| SRR1783602 | moderate drought stress | 0.561 |
| SRR1811619 | moderate drought stress | 0.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.339 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.539 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.182 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.178 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.146 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.181 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.152 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.636 |
| SRR2868004 | Drought Stress (root) | 24.170 |
| SRR2967015 | Control (root) | 23.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.218 |
| SRR9715740 | Leaf | 0.561 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.111 |
| SRR9715742 | Root | 0.313 |
| SRR9715743 | Root | 0.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.335 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.312 |
| SRR8749031 | Uninduced | 0.063 |
| SRR8749032 | Uninduced | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.148 |
| SRR8400027 | Control - Root | 1.663 |