Gene detail information of Glyur000010s00000997 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65540.1 | 0 | LETM1-like protein |
| NR | XP_004504204.1 | 0 | PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like [Cicer arietinum] |
| trEMBL | tr|I1KSP4|I1KSP4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G13240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 685774 | 692804 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000997.1 | PF07766.8 | LETM1 | 183 | 450 | 2.50E-102 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.147 |
| SRR1783600 | control | 11.030 |
| SRR1783602 | moderate drought stress | 7.954 |
| SRR1811619 | moderate drought stress | 7.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.703 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.276 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.824 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.407 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.591 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.834 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.092 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.153 |
| SRR2868004 | Drought Stress (root) | 31.123 |
| SRR2967015 | Control (root) | 31.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.838 |
| SRR9715740 | Leaf | 13.781 |
| SRR9715741 | Leaf | 22.552 |
| SRR9715739 | Root | 3.447 |
| SRR9715742 | Root | 27.042 |
| SRR9715743 | Root | 22.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 56.461 |
| SRR8749028 | MeJA induced 9h | 51.528 |
| SRR8749029 | MeJA induced 9h | 55.225 |
| SRR8749030 | Uninduced | 16.317 |
| SRR8749031 | Uninduced | 16.179 |
| SRR8749032 | Uninduced | 12.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.080 |
| SRR8400027 | Control - Root | 24.067 |