Gene detail information of Glyur000010s00000995 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65540.1 | 4.00E-20 | LETM1-like protein |
| NR | XP_003629942.1 | 1.60E-33 | hypothetical protein MTR_8g088570 [Medicago truncatula] |
| trEMBL | tr|G7L8S9|G7L8S9_MEDTR | 2.00E-32 | Leucine zipper EF-hand transmembrane protein {ECO:0000313|EMBL:AET04419.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 671286 | 673663 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.215 |
| SRR1783600 | control | 7.174 |
| SRR1783602 | moderate drought stress | 5.862 |
| SRR1811619 | moderate drought stress | 5.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.152 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.245 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.699 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.102 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.617 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.095 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.577 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.649 |
| SRR2868004 | Drought Stress (root) | 9.221 |
| SRR2967015 | Control (root) | 9.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.697 |
| SRR9715740 | Leaf | 8.678 |
| SRR9715741 | Leaf | 10.862 |
| SRR9715739 | Root | 0.598 |
| SRR9715742 | Root | 8.053 |
| SRR9715743 | Root | 6.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.127 |
| SRR8749028 | MeJA induced 9h | 20.574 |
| SRR8749029 | MeJA induced 9h | 52.157 |
| SRR8749030 | Uninduced | 13.800 |
| SRR8749031 | Uninduced | 18.290 |
| SRR8749032 | Uninduced | 13.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.185 |
| SRR8400027 | Control - Root | 10.265 |