Gene detail

Gene detail information of Glyur000010s00000989

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G55350.4	0	calpain-type cysteine protease family
NR	XP_003532791.1	0	PREDICTED: calpain-type cysteine protease DEK1-like [Glycine max]
COG	YP_003887732.1	3.00E-09	APHP domain-containing protein [Cyanothece sp. PCC 7822]
Swissprot	tr\|Q8RVL2\|DEK1_ARATH	0	Calpain-type cysteine protease DEK1 (Precursor)
trEMBL	tr\|I1KSP1\|I1KSP1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G13220.4}

Sequence

Transcript Sequence

>Glyur000010s00000989.1
ATGGAGGAAGGGGGTGACCGTGGGATTCTCCTGGCTTGTGCGATTTGCGGGACCCTCTTCNCGGTTTTGGGGTTTGCTTCCTTCTCCATACTCTGGGCTGTGAACTGGAGGCCCTGGCGAATTTATAGTTGGATCTTTGCTCGGAAATGGCCAAATATCTTGCAAGGTCCTCAACTCCATTTGCTCTGTGGTTTCCTGAATCTTTCCGCATGGTCTGTTGTTGTTTCTCCAATTATGGTGCTTATCATTTGGGGCTCCTGGTTGGTTGTAATATTGGATCGAGACCTGATTGGTTTGGCTGTAATAATGGCTGGAACTGCTCTTTTATTGGCATTTTATTCGATTATGCTGTGGTGGAGAACCCAGTGGCAAAGCTCAAGGGCTGTTGCAATTCTGCTTCTTCTGGCTGTTGCTCTACTCTGTGCATATGAACTTTGTGCAGTATATGTTACAACCGGNTACCGGGCATCTGACCGATATTCTCCTTCTGGTTTCTTTTTTGGAGTCTCTGCAATTGCTTTAGCAATCAACATGCTATTTATTTGCAGAATGGTTTTTAATGGGAATGGCTTAGATGTGGATGAATATGTGCGAAGGGCTTACAAATTTGCTTATTCTGATTGTGTCGAAGTGGGTCCTGTGGCATGTTTACCTGAACCACCAGACCCAAATGAGTTATATCCTCGGCAATCTAGAAGGGCTTCCCATCTTGTACTCCTCTATCTTGGCTCACTATTTGTTCTGTTAGTATACTCCATCTTGTATGGTCTAACCGCAAAGGAGGAAAATTGGCTTGGAGCAATCACATCAGTTGCTGTTATTATTCTTGATTGGAATATGGGAGCTTGCCTGTATGGCTTTAAACTTCTTAATAGTCGAGTTGCTGTGTTGTTTATTGCTGGAACATCTCGGGTGTTTCTTATTTGTTTTGGAGTGCAATACTGGTATTTGGGCCACTGTATCAGTTATGCTGTTATGGCTTCTGTACTTTTAGGANCTGCTGTTTCTCGCCACTTATCGGTTACAAACCCATTAGCTGCAAGGAGAGATGCGTTACAAAGCACTGTNGTTCGCCTGAGAGAAGGATTTCGTAGAAAGGATCATAACAGTTCATCTAGCTTTTCTGAAGGCTGTGGCTCAAGTATGAAACGCAGTAGTAGTGTTGAAGCCGGTAATCTTGGAAATGTCATTGACGTTGGCAGGNGTATGGCTGCAGGTGATGGGAGCAATTGGAATAATGTCATGACTCACTCTGCTAGTTTACCGGATGGAATCAATAGTGACAAAAGCATAGATAGCGGAAGGTCAAGTTTAGCATTACATAGCAGCTCCTGTCGCTCAGCTGTTCATGAGCCAGAAGTTGGAACATCATCTGATGTTAGAAATTTGGATCACAATAATTCTGTGGTGGTTTGTTCTAGTAGTGGTCTTGATAGTCAAGGGAATGACTCTAGTGCATCAAACTCTGCAAATCAACAAACATTGGATTTGAATTTGGCTCTTGCATTCCAAGAAAGGTTGAATGACCCAAAGATTGCAACTATGCTGAAAAGAAGGACAAGACAAGGTGATCGGGAACTGAGTAGTTTATTACAGGATAAAGGCTTGGATCCGAATTTTGCTATGATGTTAAAAGAGAAAAGTTTAGAATTAGATCCAACTATCCTAGCATTATTGCAGAGGAGTAGTCTGGATGCGGATAGAGATCATCATGAAAATACTGATAATACCAGTGTTGACAATGCTATACCTAATCAGATTTCATTATCTGAAGAACTGAGGCTACACGGGCTTGAAAAATGGCTTCAGTTGTGCAGACTTGTATTGCATCACATTACAGGAACTCCAGAACGAGCGTGGGTTCTGTTTAGCTTTATTTTCATACTTGAAACTGTCATTGTTGCTATATTTCGTCCAAAAACAATCAAAATTATTAATGCAACACATCAACAGTTTGAGTTTGGATTGGCAGTGCTGTTGTTGTCTCCTGTGATATGTTCTATTATGGCTTTCCTTCGATCACTTACAGTAGAAGAAATGGCCATGACATCAAAACCAAGGAAGTATGGTTTTATTGCTTGGCTGCTCAGCACTTGTGTTGGATTGTTGCTCTCCTTTTTAAGCAAATCATCCGTTCTCCTTGGATTGTCCTTGACTGTGCCACTAATGGTGGCATGCCTTTCTATTGCCGTTCCTATATGGATTTGTAATGGATACCAATTCTGGGTCCCCCATATAAATTGTACTGGAAGTGCGGGAAATGATCGCATTCCTTGTTCAAAGGGTATAGTTCTCATTATTTGTATGTCAGTATTTNTTGGATCTGTACTGGCTTTGGGAGCAATAGTTTCTGCAAAGCCTTTAGATGATTTAAGATACAAGGGATGGAATGGTGATCAGAAAAGCTTGGGCTCCCCTTACACATCGTCTGTTTTTCTTGGCTGGGCAATGGCATCTGCCATTGGCTTGGTTGTTACTAGTGTGCTTCCAATAATTTCCTGGTTTGCAACATATCGGTTCTCCCCTTCCTCTGCTATCCTTATTGGAATATTTGCAGTTATCCTTGTAGCATTTTGTGGAGTGTCTTATTTAGAAGTTATCAAATCTAGGGATGACCAAGTTCCAACAAAGGGTGATTTTTTAGCGGCTTTACTTCCTTTAGTCTGCATTCCAGCAATGCTCTCCCTTTGCTGCGGATTGCTTAAGTGGAAGGATGATGATTGGAAACTTTCTCGAGGTGTATATATTTTTGTTATAATTGGTCTTCTGCTTCTGCTTGGTGCTATTTCAGCTTTGATAGTTGTTGTCNAGCCTTGGACTGTAAATAAACCATTTGTTGGAGCATCGGTTGGTTATTTTTTATTTCTCTTTCTTCTTGCTGGACGGGCATTAACAGTTCTGCTTTCAAATCCTATTGTGGTATATTCTCCCCGAGTTTTGCCAGTGTATGTGTATGATGCTCATGCAGATTGTGGAAAGAATGTCAGTGTTGCCTTTCTCATGCTATATGGGATTGCCCTGGCAACTGAAGGCTGGGGGGTTGTTGCCAGTTTAAAGATTTATCCACCCTTTGCTGGTGCAGCAGTATCAGCAATAACACTTGTTGTTTCATTTGGGTTTGCTGTCTCTCGTCCTTGCCTAACTCTTAAGATGATGGAAGATGCTGTACATTTTCTCGGCAAGGAAACTGTTATTCAAGCAATTGCTAGATCAGCAACAAAGACCAGAAATGCAATATCTGGAACTTACTCAGCCCCACAGAGGTCAGCTAGTTCTGCAGCCCTTTTGATTGGAGACCCTACCATTATGCGTGATAGGGCNGGAAGTTTTGTGCTTCCCAGAGCTGACGTCATGAAATTGAGAGACCGTTTGAGAAATGAAGAATTGGTTGCAGGTTCATTCTTTAGTAGATTAAGATATCAAAGTACATTTCGCCATGAGCCAACCAGTGATGTAGATCACAGAAGAGTAATGTGTGCACATGCACGGATTCTGGCTTTAGAAGAGGCTATTGATACTGAATGGGTGTACATGTGGGATAAGTTTGGTGGTTATTTACTTTTGTTGCTTGGTTTGACGTCTAAGGCAGAACGAGCACAGGATGAAGTTCGTTTGAGACTCTTTCTTGACAGCATTGGATTTTCTGACTTAAGTGCTAAGAAAATAAAGAAGTGGATGCCAGAAGATCGCAGGCAATTTGAAATCATTCAGGAGAGTTACATAAGAGAAAAGGAGATGGAAGAGGAAATCTTCATGCAGAGGCGTGAAGAGGAGGGGAGAGGGAAAGAAAGGAGGAAGGCCCTACTTGAAAAAGAGGAACGCAAATGGAAGGAGATAGAAGCTTCTCTGCTCTCCTCCATTCCTAATGCTAGCAGCAGAGAGGCNGCAGCCATGGCAGCGGCAGTGCGTGCAGTTGGAGGTGATTCCGTTCTAGATGATTCTTTTGCTCGAGAGAGGGTTTCAAGCATTGCACGTAGAATACGTGCTTCACAGTTAGCTCGCCGTGCACTTCAGACAGGAGTGACAGGTGCCATATGTCTTCTTGATGATGAGCCAACAGGAAGTGGCAGGCTTTGTGGTCCAATTGATTCCAGTCTATGTCAAAGTCAAAAGGTTACCTTCTCCGTTGCATTGATGATTCAACCTGAGTCTGGTCCTGTTTGTCTTTTGGGCACTGAGTTTCAGAAGAAGGTTTGCTGGGAAATTCTTGTGGCTGGTTCTGAACAAGGTATTGAGGCTGGGCAAGTTGGGCTTAGATTGATTACTAAAGGTGATAGGCAAACGACTGTTGCAAAGGAGTGGAGTATTAGTGCAACAAGTATTGCAGATGGAAGGTGGCATATTGTAACAATGACAATTGATGCTGATTTAGGGGAAGCAACGTGTTATTTAGATGGTGGATTTGATGGATACCAGAATGGGTTACCATTGTGTGTGGGTAGTAGCATTTGGGAACAGGGGACGGAAGTGTGGGTTGGAGCTAGACCGCCANCAGATATTGACGCATTTGGTAGGTCAGATAGTGAAGGGGTTGAATCTAAGATGCACATTATGGATGCTTTTCTCTGGGGAAGATGCTTAACTGACGANGAAGTTTCTGCTCTCTATACCTCGATGGCTTCCGCGGACTTCGGTGCACTTGATTTCCCTGAAGACAATTGGCAGTGGGCTGATTCACCCTCTAGGGTTGATGGTTGGGACAGTGATCCTGCTGATGTNGATTTGTATGACAGAGATGAAGTGGATTGGGATGGACAGTATTCTAGCGGGAGGAAAAGAAGGTCAGACCGTGATGGCATGGTGGTGGACATGGATTCCTTTTCTAGAAAGTATAGAAAACCTAGAATTGAAACACAAGAGGAGATTAATCAACGGATGCTATCGGTAGAACTGGCCATCAAAGAAGCTCTCTATGCTAGAGGAGAGTCACGTTTTACTGATCAGGAATTTCCTCCGAATGATCTCTCATTGTTTGTGGACCCTGAAAGCCCCCCAACAAAGTTACAGGTTGTTTCTGAGTGGTTGAGACCAGGTGAAATTGCTAGACAGAACCATCCAGACTATCGTCCGTGCTTATTTTCAGGACCACCAAATCCTTCAGATGTTTGTCAGGGCCGGTTGGGTGATTGTTGGTTCTTGAGTGCTGTTGCTGTTCTGACAGAGGTTTCACGTATATCAGAGGTAATCATCACTCCAGGATATAATGAGGAGGGAATTTACACTGTTCGCTTTTGTGTTCAGGGTGAATGGATCCCTGTTGTTGTTGATGATTGGATTCCGTGTGAGTTACCGGGTAAACCAGCTTTTGCTACTAGTAAGAAGGGTTATGAACTTTGGGTCTCTATTTTGGAGAAGGCATATGCNAAGTTGCATGGCTCTTATGAAGCACTAGAAGGTGGGCTTGTTCAGGATGCTCTGGTGGATCTTACTGGGGGTGCAGGGGAGGAAATTGACATGAGGAGTGGTGAAGCCCAGATTGACCTTGCAAGTGGTAGATTGTGGTCCCAGTTGTTACGCTTCAAGCAAGAAGGTTTTCTCCTAGGTGCTGGAAGTCCTTCAGGTTCAGATGTGCACATCTCTTCTAGTGGCATTATCCGAAATCCATGGGCCAATGAAGTTGAGTGGAATGGTCCCTGGTCTGACTCATCACCTGAATGGACAGATAGGATAAAGCACAAGCTGAAGCATGTTCCGCAGTCAAAAGATGGTATATTCTGGATGTCCTGGCAAGATTTTCAGATCCATTTCCGATCGATCTATATTTGTCGGATCTATCCATCAGAGATGCGTTATTCTGTCCATGGTCAATGGCGCGGATACAGTGCTGGTGGGTGTCAGGATTATGATACATGGCATCAAAATCCACAGTTCAGACTGACTGCAACTGGGCAAGATGCATCATTTCCAATTCATGTATTCATTACCTTAACTCAGGGTGTGGGATTTTCTAGAACAACGGCTGGTTTCAGAAATTATCAATCCAGCCATGATTCACTGATGTTCTACATTGGAATGAGGATACTTAAAACTCGTGGCCGGCGTGCTGCTTTCAATATATACCTACATGAATCAGTTGGTGGGACAGACTATGTTAATTCTCGAGAAATATCCTGTGAAATGGTTCTGGAACCGGAGCCAAAGGGATACACTATCGTTCCTACCACTATACACCCTGGGGAAGAAGCACCCTTTGTGCTTTCGGTTTTCACCAAGGCATCAATAACTCTGGAAGCTTTGTAGTGCCTAGGGATAGCTACCTGTTATATCCTGTCCTCTTGACAAGTTTTTGCTCGAGTTCTCNGGGGATTATGTACTTGCACTGCTGAGGCCCTGCTTAGAACAATTGGCCTGTGATTATTTGATTCTTAAAGGTTGAAGTTTCTAGCATGAGTGGACAGCCTCACATCATTGGGATACGATTCCTGAAGGGAATGACTAGGCATCTGTTCGAGCCACGAGGAAAATCTTTTGTATGAATGCTTGGTCTTTTAATCTGGTGATTCCATCATCTTGAACCATGGCATGCATCTGCCAGCATTGAAGAGGNCTGTCGGGGGTGTTTATTGTGTACATAGAAAGTGGTACTATAGGGGTATACTTGTAACCATCTAAACAAAGTGGGAAAGGAAATAGCTGAAAATAAGTAGGAAATTACTAACATCTGGTTCAATTGGAGGTGAAGTGGGTGGAGGAGGTATAGTAACAAGCATTGAGTAAACTGATTGTAAATCCAGCTCCTTTTTTACTCTTGCAAAAANGTTGTACA

Protein Sequence

>Glyur000010s00000989.1
MEEGGDRGILLACAICGTLFXVLGFASFSILWAVNWRPWRIYSWIFARKWPNILQGPQLHLLCGFLNLSAWSVVVSPIMVLIIWGSWLVVILDRDLIGLAVIMAGTALLLAFYSIMLWWRTQWQSSRAVAILLLLAVALLCAYELCAVYVTTGYRASDRYSPSGFFFGVSAIALAINMLFICRMVFNGNGLDVDEYVRRAYKFAYSDCVEVGPVACLPEPPDPNELYPRQSRRASHLVLLYLGSLFVLLVYSILYGLTAKEENWLGAITSVAVIILDWNMGACLYGFKLLNSRVAVLFIAGTSRVFLICFGVQYWYLGHCISYAVMASVLLGXAVSRHLSVTNPLAARRDALQSTVVRLREGFRRKDHNSSSSFSEGCGSSMKRSSSVEAGNLGNVIDVGRXMAAGDGSNWNNVMTHSASLPDGINSDKSIDSGRSSLALHSSSCRSAVHEPEVGTSSDVRNLDHNNSVVVCSSSGLDSQGNDSSASNSANQQTLDLNLALAFQERLNDPKIATMLKRRTRQGDRELSSLLQDKGLDPNFAMMLKEKSLELDPTILALLQRSSLDADRDHHENTDNTSVDNAIPNQISLSEELRLHGLEKWLQLCRLVLHHITGTPERAWVLFSFIFILETVIVAIFRPKTIKIINATHQQFEFGLAVLLLSPVICSIMAFLRSLTVEEMAMTSKPRKYGFIAWLLSTCVGLLLSFLSKSSVLLGLSLTVPLMVACLSIAVPIWICNGYQFWVPHINCTGSAGNDRIPCSKGIVLIICMSVFXGSVLALGAIVSAKPLDDLRYKGWNGDQKSLGSPYTSSVFLGWAMASAIGLVVTSVLPIISWFATYRFSPSSAILIGIFAVILVAFCGVSYLEVIKSRDDQVPTKGDFLAALLPLVCIPAMLSLCCGLLKWKDDDWKLSRGVYIFVIIGLLLLLGAISALIVVVXPWTVNKPFVGASVGYFLFLFLLAGRALTVLLSNPIVVYSPRVLPVYVYDAHADCGKNVSVAFLMLYGIALATEGWGVVASLKIYPPFAGAAVSAITLVVSFGFAVSRPCLTLKMMEDAVHFLGKETVIQAIARSATKTRNAISGTYSAPQRSASSAALLIGDPTIMRDRAGSFVLPRADVMKLRDRLRNEELVAGSFFSRLRYQSTFRHEPTSDVDHRRVMCAHARILALEEAIDTEWVYMWDKFGGYLLLLLGLTSKAERAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDRRQFEIIQESYIREKEMEEEIFMQRREEEGRGKERRKALLEKEERKWKEIEASLLSSIPNASSREAAAMAAAVRAVGGDSVLDDSFARERVSSIARRIRASQLARRALQTGVTGAICLLDDEPTGSGRLCGPIDSSLCQSQKVTFSVALMIQPESGPVCLLGTEFQKKVCWEILVAGSEQGIEAGQVGLRLITKGDRQTTVAKEWSISATSIADGRWHIVTMTIDADLGEATCYLDGGFDGYQNGLPLCVGSSIWEQGTEVWVGARPPXDIDAFGRSDSEGVESKMHIMDAFLWGRCLTDXEVSALYTSMASADFGALDFPEDNWQWADSPSRVDGWDSDPADVDLYDRDEVDWDGQYSSGRKRRSDRDGMVVDMDSFSRKYRKPRIETQEEINQRMLSVELAIKEALYARGESRFTDQEFPPNDLSLFVDPESPPTKLQVVSEWLRPGEIARQNHPDYRPCLFSGPPNPSDVCQGRLGDCWFLSAVAVLTEVSRISEVIITPGYNEEGIYTVRFCVQGEWIPVVVDDWIPCELPGKPAFATSKKGYELWVSILEKAYAKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSGEAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVHISSSGIIRNPWANEVEWNGPWSDSSPEWTDRIKHKLKHVPQSKDGIFWMSWQDFQIHFRSIYICRIYPSEMRYSVHGQWRGYSAGGCQDYDTWHQNPQFRLTATGQDASFPIHVFITLTQGVGFSRTTAGFRNYQSSHDSLMFYIGMRILKTRGRRAAFNIYLHESVGGTDYVNSREISCEMVLEPEPKGYTIVPTTIHPGEEAPFVLSVFTKASITLEAL

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00010	630033	650296	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

cellular_component
GO:0005622 intracellular

molecular_function
GO:0004198 calcium-dependent cysteine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000010s00000989.1	PF13385.1	Laminin_G_3	1373	1532	4.80E-07
Glyur000010s00000989.1	PF00648.16	Peptidase_C2	1645	1839	1.80E-44
Glyur000010s00000989.1	PF00648.16	Peptidase_C2	1865	1924	5.10E-14
Glyur000010s00000989.1	PF01067.17	Calpain_III	1932	2076	1.80E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.745
SRR1783600	control	12.751
SRR1783602	moderate drought stress	24.260
SRR1811619	moderate drought stress	24.194

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.036
DRR006520	Root Summer glycyrrhizin high producing strain	14.886
DRR006521	Root Winter glycyrrhizin high producing strain	11.302
DRR006522	Root Winter glycyrrhizin high producing strain	10.972
DRR006523	Root Summer glycyrrhizin low producing strain	14.115
DRR006524	Root Summer glycyrrhizin low producing strain	14.027
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.743
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.730

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.207
SRR2868004	Drought Stress (root)	28.911
SRR2967015	Control (root)	33.703

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.618
SRR9715740	Leaf	14.429
SRR9715741	Leaf	15.924
SRR9715739	Root	4.319
SRR9715742	Root	29.529
SRR9715743	Root	25.066

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.428
SRR8749028	MeJA induced 9h	16.598
SRR8749029	MeJA induced 9h	10.480
SRR8749030	Uninduced	8.055
SRR8749031	Uninduced	5.759
SRR8749032	Uninduced	7.194

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	34.703
SRR8400027	Control - Root	34.401