Gene detail information of Glyur000010s00000988 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13510.1 | 0 | Protein of Unknown Function (DUF239) |
| NR | XP_003524998.1 | 0 | PREDICTED: uncharacterized protein LOC100809342 [Glycine max] |
| trEMBL | tr|I1K482|I1K482_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G30070.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 622648 | 626308 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000988.1 | PF14365.1 | DUF4409 | 53 | 176 | 8.60E-52 |
| Glyur000010s00000988.1 | PF03080.10 | DUF239 | 181 | 410 | 5.80E-93 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 115.457 |
| SRR1783600 | control | 115.515 |
| SRR1783602 | moderate drought stress | 132.379 |
| SRR1811619 | moderate drought stress | 132.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 148.586 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 146.771 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.021 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.980 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 146.088 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 145.354 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 45.399 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 45.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 105.362 |
| SRR2868004 | Drought Stress (root) | 108.454 |
| SRR2967015 | Control (root) | 138.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 38.558 |
| SRR9715740 | Leaf | 24.382 |
| SRR9715741 | Leaf | 32.584 |
| SRR9715739 | Root | 49.676 |
| SRR9715742 | Root | 73.913 |
| SRR9715743 | Root | 69.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.840 |
| SRR8749028 | MeJA induced 9h | 7.277 |
| SRR8749029 | MeJA induced 9h | 10.159 |
| SRR8749030 | Uninduced | 0.223 |
| SRR8749031 | Uninduced | 0.206 |
| SRR8749032 | Uninduced | 0.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 164.613 |
| SRR8400027 | Control - Root | 188.781 |