Gene detail information of Glyur000010s00000979 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G29130.2 | 2.00E-44 | |
| NR | XP_003524994.1 | 3.60E-74 | PREDICTED: kxDL motif-containing protein CG10681-like isoform X1 [Glycine max] |
| trEMBL | tr|I1K477|I1K477_SOYBN | 1.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G30010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 557553 | 560749 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000979.1 | PF10241.4 | KxDL | 27 | 113 | 1.10E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.607 |
| SRR1783600 | control | 28.497 |
| SRR1783602 | moderate drought stress | 30.725 |
| SRR1811619 | moderate drought stress | 29.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.798 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.775 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.579 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.531 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.456 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.568 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.447 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.716 |
| SRR2868004 | Drought Stress (root) | 20.264 |
| SRR2967015 | Control (root) | 18.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.352 |
| SRR9715740 | Leaf | 7.830 |
| SRR9715741 | Leaf | 7.092 |
| SRR9715739 | Root | 8.464 |
| SRR9715742 | Root | 6.073 |
| SRR9715743 | Root | 6.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.875 |
| SRR8749028 | MeJA induced 9h | 18.560 |
| SRR8749029 | MeJA induced 9h | 42.966 |
| SRR8749030 | Uninduced | 14.605 |
| SRR8749031 | Uninduced | 11.990 |
| SRR8749032 | Uninduced | 10.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.648 |
| SRR8400027 | Control - Root | 23.067 |