Gene detail

Gene detail information of Glyur000010s00000978

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G34710.1	Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
NR	XP_004504217.1	PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Cicer arietinum]
Swissprot	tr\|Q6AST1\|HOX32_ORYSJ	Homeobox-leucine zipper protein HOX32
trEMBL	tr\|I1KSN0\|I1KSN0_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G13110.1}

Sequence

Transcript Sequence

>Glyur000010s00000978.1
GGCTGTTGTTCTGTATTTTTTTTATTTTTTGCATTTGCATTTCACTGTGATACTGATACGTAAGCAACACAACACAAAAAAACGCTCTTTGTTCCATCCCTTTCTGTGGGTGTGCTCTCTTCTCTTGTTCTCTCTCTCTATCTGTGTCTCGAGATTTGTGTGTAAATATAAACCACAGTAGCTAGCACCCCATCTTCTTCATTCCTCAAACTCTCTTCCAAGTTTGGATTTTTCAAACATCTGATGAAGGAGAGTGAAGGCTCTCGAGAGAGCCTATCCGAGACAAACAGCAAAGAAGAAGAAGACCCCAAAACCAGTTTTTTCTTCTCTTCACTCTGAAACAACGAACCCCATTTTTCTCTTGTCCTGTAGTGTGGTGTTGTTATGGCGCTTTCTATGCACAGAGATTCTTCATCAAACAAGGGTCACATGGATTGTAGCAAGTATGTAAGGTATACACCTGAGCAAGTGGAGGCTTTGGAGAGAGTCTATGCTGAATGCCCAAAGCCAAGCTCTTCCAGAAGACAACAACTCATTAGGGAGTGCCCCATCCTTTCCAATATTGAACCAAAACAGATCAAAGTTTGGTTTCAGAATCGCAGATGTCGTGAAAAACAGCGCAAGGAGTCCTCTCGTCTGCAGACGGTGAATAGGAAGCTGACTGCGATGAACAAGTTGTTGATGGAAGAGAATGACCGTCTGCAGAAGCAGGTCTCGCAGATGGTTTATGAAAATGGTTACATGAAACAACAAATACAGACCGCATCTGCTACTACTACAACAGACAATAGCTGTGANTCTGTGGTAATGAGTGGTCATCAGCAACAGCAAATCCCAAAAACTCAGCATCCTCAGTGGGATGCCAATGACCCAGCTAGTCTTCTCGCAATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACCGCTGTCAACTGGGTCCAAATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCGACTGTAGTGGGGTGGCAGCACGAGCCTGTGGCCTTGTGAGCCTGGAGCCCACAAAGGTTGCCGAGATTCTTAAAGATCGTCCATCATGGTATCGTGACTGTCGATGCCTTGATGTATTGAGCATAGTCCCCACAGGAAATGGGGGCACAATAGAGCTCATNTACATGCAGACTTATGCACCTACAACATTGGCAGCAGCAAGAGACTTCTGGACACTAAGATACACAAGAAGTTTGGAAGATGGAAGTCTTGTGATTTGTGAGAGATCCTTGACTTCGTCAACTGGTGGTCCAATAGGGCCTCCTGCTTCAAACTTCGTAAGAGNTGAAATGCTTCCTAGTGGCTATCTAATTAGATCCTGTGAGGGTGGTGGATCTATTGTTCACATTGTTGATCACCTTGATTTAGATGTTTGGAGTGTTCCTGAAGTACTGAGGCCCCTCTATGAGTCATCAAAATTCTTGGCTCAGAAATTGACTATTGCTGCCTTGCGACATATAAGACAGATTGCTCTAGAATCAAGTGGAGAAGTTCATTATGGAGGGGGGCGTCAGCCAGCTGTCTTGAGGACATTTAGTCAGAGACTTTGCAGAGGGTTTAANGATGCTGTCAACGGGTTTGTGGATGATGGTTGGTCTTTGATGGGTAATGATGGGGTGGAAGATGTGACCATAGCCATAAACTCATCTCCCAACAAGTTTTTTGGCTCCCATTACAATGCGTCAATGCTTCCAGCCTTTGGAGGCGGGGTCATGTGTGCCAAGGCATCAATGCTGCTGAAGAATGTTCCTCCTGCTTTGCTTGTTCGATTCTTGAGGGAGCATCGTTCAGAGTGGGCTGATTATGGAGTTGATGCATATTCTTCTGCATGTCTTAAGGCTAGTACTTATGCTGTTCCTTGTGCAAGACCTGGTGGCTTCCCGAGCAGCCAGGTCATTTTACCACTTGCTCATACTCTTGAGCATGAGGAGTTCTTGGAGGTAGTTCGTATAGAGGGTCATGCATTTTCCCCGGAAGATGTGGCTTTGGCACGCGATATGTATCTACTGCAGCTGTGCAGTGGAGTTGATGAAAATGCAGTCGGAGCATGTGCACAGCTTGTGTTTGCGCCTATTGATGAATCATTTGCAGATGATGCTTTCTTACTGCCTTCTGGTTTCCGCATCATACCTTTGGATCCCAAAACAGATGGTTCAGCTGCAACTAAGACATTGGATTTGGCATCAACACTGGAAATAGGATCTGGTAATTCCCATCCAGCTGACAAAGATAGGTCGGTCCTTACGATTGCATTCCAGTTTACCTTTGAGAACCATTTGCGGGACAATGTGGCTGCTATGGCTCGCCAATATGTGCGTAGTGTTGTGCGATCTGTTCAGAGGGTTGCCATGGCAATTGCTCCCTCTCCATTTAGTACGCAGTTGGGGTCAATGTCACTTTCTGGTCCTCCAGAGGCTCTTACTTTAGCGCGATGGATCTGTAGAAGCTACAAGATCCACACCCACACCGAGCTTTTTAGAGCCGAGTCCATGGCCGGTGACGCAATCTTGAAGCAGCTTTGGCACCATTCGGATGCAATAATGTGCTGTTCTATAAAAACAAATGCATCTCCTGTTTTCACCTTTGCAAACCAAGCTGGACTTGACATGCTTGAAACCACGCTTGTTGCCCTTCAAGACATAATGCTCGATAAAGTTCTCGATGAAGCGAGCAGGAAGATTCTCTACTTGGAGTTCTCCAAGATAATGCAGCAGGGATTTGCATATCTGCCAGCAGGAATATGTGTATCCGGCATGAATCGACCGGTGTCNTATGAGCAGGCCATTGCATGGAAAGTTCTAGATGACAATGATTGTAATCACTGCTTGGCCTTCATGTTCATGAACTGGTCTTTTGTCTGATGGGAAAACCATCTTTAAGATACTTATAAATATCTATTATTAGTCTATATGTTTGAGTACTTTCATTATCAGATAATGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00010	545781	551928	+

Gene family

Gene family	subfamily
Transcription Factors Family	HB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003677 DNA binding

GO:0008289 lipid binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000010s00000978.1	PF00046.24	Homeobox	20	78	1.50E-16
Glyur000010s00000978.1	PF01852.14	START	169	376	7.60E-49
Glyur000010s00000978.1	PF08670.6	MEKHLA	692	841	3.90E-59

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.016
SRR1783600	control	2.088
SRR1783602	moderate drought stress	2.849
SRR1811619	moderate drought stress	2.784

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.316
DRR006520	Root Summer glycyrrhizin high producing strain	7.089
DRR006521	Root Winter glycyrrhizin high producing strain	6.943
DRR006522	Root Winter glycyrrhizin high producing strain	6.683
DRR006523	Root Summer glycyrrhizin low producing strain	6.083
DRR006524	Root Summer glycyrrhizin low producing strain	5.802
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.096
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.055

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.975
SRR2868004	Drought Stress (root)	10.287
SRR2967015	Control (root)	16.215

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.243
SRR9715740	Leaf	0.611
SRR9715741	Leaf	0.476
SRR9715739	Root	1.026
SRR9715742	Root	2.458
SRR9715743	Root	2.589

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	31.646
SRR8749028	MeJA induced 9h	27.054
SRR8749029	MeJA induced 9h	31.337
SRR8749030	Uninduced	2.249
SRR8749031	Uninduced	2.227
SRR8749032	Uninduced	5.478

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.038
SRR8400027	Control - Root	13.493