Gene detail information of Glyur000010s00000970 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004504225.1 | 0 | PREDICTED: uncharacterized protein LOC101503222 isoform X3 [Cicer arietinum] |
| trEMBL | tr|K7L685|K7L685_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G13011.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 500019 | 505874 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000970.1 | PF03004.9 | Transposase_24 | 383 | 513 | 2.30E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.515 |
| SRR1783600 | control | 22.686 |
| SRR1783602 | moderate drought stress | 29.683 |
| SRR1811619 | moderate drought stress | 29.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.063 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.890 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.727 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.470 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.426 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.681 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.673 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.973 |
| SRR2868004 | Drought Stress (root) | 49.824 |
| SRR2967015 | Control (root) | 53.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.459 |
| SRR9715740 | Leaf | 28.765 |
| SRR9715741 | Leaf | 27.116 |
| SRR9715739 | Root | 2.218 |
| SRR9715742 | Root | 12.815 |
| SRR9715743 | Root | 11.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 80.649 |
| SRR8749028 | MeJA induced 9h | 70.521 |
| SRR8749029 | MeJA induced 9h | 68.027 |
| SRR8749030 | Uninduced | 65.353 |
| SRR8749031 | Uninduced | 78.261 |
| SRR8749032 | Uninduced | 58.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.995 |
| SRR8400027 | Control - Root | 39.101 |