Gene detail information of Glyur000010s00000969 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29810.1 | 9.00E-38 | Transcriptional coactivator/pterin dehydratase |
| NR | NP_001240247.1 | 6.26E-72 | uncharacterized protein LOC100779634 [Glycine max] |
| COG | YP_004178270.1 | 2.00E-31 | pterin-4-alpha-carbinolamine dehydratase [Isosphaera pallida ATCC 43644] |
| trEMBL | tr|C6TE00|C6TE00_SOYBN | 2.00E-72 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G12980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 496809 | 498621 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000969.1 | PF01329.14 | Pterin_4a | 21 | 115 | 3.30E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.095 |
| SRR1783600 | control | 0.089 |
| SRR1783602 | moderate drought stress | 0.397 |
| SRR1811619 | moderate drought stress | 0.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.283 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.100 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.397 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.561 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.791 |
| SRR2868004 | Drought Stress (root) | 0.716 |
| SRR2967015 | Control (root) | 1.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.165 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 34.271 |
| SRR8749028 | MeJA induced 9h | 15.272 |
| SRR8749029 | MeJA induced 9h | 24.554 |
| SRR8749030 | Uninduced | 41.259 |
| SRR8749031 | Uninduced | 24.986 |
| SRR8749032 | Uninduced | 112.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.351 |
| SRR8400027 | Control - Root | 0.329 |