Gene detail information of Glyur000010s00000961 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G13420.1 | 0 | high affinity K+ transporter 5 |
| NR | XP_003629906.1 | 0 | Potassium transporter [Medicago truncatula] |
| COG | YP_001547763.1 | 3.00E-82 | K potassium transporter [Herpetosiphon aurantiacus DSM 785] |
| Swissprot | tr|Q9M7K4|POT5_ARATH | 0 | Potassium transporter 5 |
| trEMBL | tr|G7L825|G7L825_MEDTR | 0 | Potassium transporter {ECO:0000256|RuleBase:RU321113} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 469146 | 473473 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000961.1 | PF02705.11 | K_trans | 28 | 533 | 4.80E-159 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.299 |
| SRR1783600 | control | 0.342 |
| SRR1783602 | moderate drought stress | 0.102 |
| SRR1811619 | moderate drought stress | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.050 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.051 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.042 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.084 |
| SRR2868004 | Drought Stress (root) | 18.340 |
| SRR2967015 | Control (root) | 6.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.343 |
| SRR9715743 | Root | 0.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.067 |
| SRR8749028 | MeJA induced 9h | 0.001 |
| SRR8749029 | MeJA induced 9h | 0.001 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.134 |
| SRR8400027 | Control - Root | 24.471 |