Gene detail

Gene detail information of Glyur000010s00000959

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G29350.1	2.00E-164	Kinase-related protein of unknown function (DUF1296)
NR	XP_004504230.1	0	PREDICTED: serine/threonine-protein kinase pakD-like [Cicer arietinum]
trEMBL	tr\|I1KSL3\|I1KSL3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G12940.1}

Sequence

Transcript Sequence

>Glyur000010s00000959.1
CAAAGATACGCTGGACATCACCTTAAATTTAATATCAAAAAGAAGAAAGAAAAATAATCATAATCATTGATAACGTTGACGATTGATGAAGATTTTAACAAATTAATCAATTAATTTAATTAATTGTATACAAGGGATTGTGAATTAAAAAAAAACCTACGAAAAAAACTCAGAAGGGCGAGAGAGAGCGCGAGAGATAGAAAACGAGAATAGGGGTTTTGCTTCATTCTTTTTCCGTTTCGCTGCAAATCGAGATAGAGAGAGAAAGAAAGAGAAAGAGAGAGAAACAGCGAGAGAGAGAGAGATTTTGATCGCGCTGTAGGTGTTGGTGTTGCGGCGGAACCCTAGAGAGGAGCGTGGCGGGGAGGGTGATCGGAGAGTGAGGAGGATGAGCGGAAAAGGTGGGGCCCAGAAGGGTTCGTCGTTGGCGGGGATTCCGGCGGCGAGTCGTAAGATGGTGCAGAGCTTGAAGGAGATAGTCAGCAACATCCCCGACAACGAGATCTACGCCACCCTCAAGGACTGTAACATGGACCCTAACGAAGCTGTTAGTCGCCTCCTCTCTCAAGATCCTTTTCACGAGGTCAAGAGCAAACGAGAAAAGAAAAAAGAGGTGATTAAGGACACGACAGATTCAAGGTCTCGTGGGACAAACAATAATACATCTAGTCGTGGTGGTGCTAGGGCTGGCACAGACCGCTATGTTGGGCGTGGGGGTTCAAGTGCAACCCAATTCAGTAGTAGTGACTCTGGTCTCCTACAGGGAAAACCCGTATACAAGAAGGAAAATGGAACGCCTGCTTATGGAGGCTATACATCTTCTGCATCTAGTGTGCCGGAGAATAATGTGACCAGGCAACTACCATCCTACAGTGATTCTGTCGGTGTCTTTGATGGACTATCTTCATCATCACAACATGGTGGATTGCAATCTGCATGGACGGTGAACCCGGGTCAAGTATCAATGGCTGACATTGTCAAGATGGGTAGGCCACAGGCCAAGCCATCCGTGCCTAACTCTTCTGTTCACAGTGGTAATCATCAGAATGTTTCTGCACCCCCAGCAGCCTCACATCACAACTTGCATTCGTTGCAAGGTTATGCTTCCAAGGTTGCAGAGACAAACAATGATCAAGGCTTTGCCATTAACCCCAATGTTCAACAGGATGATGAATGGCCTTCTATTGAGCACCAGTCAACTGTTTGTGTATCCTCTGTTGTTGATGCTCATCCAAATTCCGAGTACTACACAAACTCATCTAACTTTGGTGAAGCTAATAGGCAACTGAAGAACCACGTAAATGAATTTGTAGCTGAAGATGGTCCTGTTGAGAATTCAGACAATGTTGGACCTGCTTCTATGCCTGCTAAAAGTATATCTGAGGATAATCCAGAAAGTGCTTCTGCATTTGATGATAGCTTGTATAAGGACATTGATTCCTACCAGTCTCATCAGCATCCTTTTGATAACAATGAAGCTGAAGATGGCGTTTCATCAGTGGCTGCAAACATGGAGCAGCTAAATTTACACACAGATGATCAAGATACAGAACCAGAGGAGGACCATCCTTCTGTAGTAATTCCAAATCATCTGCAACTCCATACTCCAGAATGCTTTAATCTGAGCTTTGGAAGTTTTGGATCTGCAAACAATGCTTCCCTTTCTGGATCTGAGCCACATGCATCTAGGCCCTTGAAAAGTAACTTGGAGGAGACATCTGGAGCAACCGATGTCTCAGCAATTGGGTCCTCAGATGCTAGAAATCCTGACTATTATGGGGATGAGCATCTTACGACTACCTCGGATGGGAATATAGCCCACATAACTGGTGTGGATGCTCATGCTAGGACTTATGAACATTCTTCCATTTCNCAACCAGAGGCTTTAAAATCTGAATCCCCTGAAACTGCTCAGGAAAATCAATATTCCTTTCCATCNTCTTCGCATGAGTTTGCCTATGAGAATACCCAACAACCAGATGTTACATATCCTCATTCACAGTCAAGCTCACAGATCCAGAACCTGTCTCCCTTCTCNAGTGTAATGGCATATACAAATTCTTTGCCCAGTGCTCTGTTGGCTTCAACGGTTCAAACAGCAAGGGAGGATATCCCATACTCACCCTTCCCTGTAACACAATCAATGCCGAAATATAGCAACATTGCTTCTTCAATTGGTGGACCCACTATAACCATGTCTGAGGCTTTAAGAGCAAACAACATTTCGACGCCTCAACCTAATCCACAAGCTTTGCCTGGTGCCAGTGTTGCCACTGGACCTTCACTTCCTCAACACCTTGCTGTGCATCCCTACTCCCAGCCTACCCTTCCTTTGGGACATTTTGCTAATATGATTAGCTATCCATTCTTGCCTCAGAGCTACACCTACATGCCATCGGCATTTCAGCAGGCTTTTGCTGGAAATAGCACATACCACCAATCTCTGGCAGCTGTGCTTCCACAATATAAAAACAGCATTTCTGTCAGCAGCTTGCCTCAGTCTGCTGCTGTTCCGTCTGGATACGGTTTTGGAAGTTCCACCAGTATTCCTGGAGGAAATTATCCTTTGAATCCACCGGCTGCCCCTACTAGCACAACCATTGGATATGACGATGTCATAAGCTCCCAGTATAAGGACAATAATCATATGATTTCACTACAGCAGCAGAACGAGAATTCTCCCATGTGGGTTCATGGGCCTGGCTCTCGAACAATGTCTGGAGTTCCTCCCAGCACGTATTACAGCTTCCAGGGACAGAATCAACAACCAGGTGGATTTCGGCAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCATCACAGCATTTTGGACCCCATGGGTACCCGAATTTCTACCATTCTCAGACTGGGATTTCTCTGGAACACCAGCAGCAGAATCCTAGGGAAGCATCCCTTGCTGGTTCTCAAAGCCAACCACCCAAGCAGTCCCAACAAATATGGCAAAACAGCTACTAATCCTAATCACCTCCCGGCTTTTAAGGGTCTTGATGTGAGTTTGAAAATGACCAACCAATCAGAGGCATTCCCACGGTCTTAATTATTATGTGTCCCATTGTTTGGTCTGAAGAGACCATTATATGGCCGTGCGACGAAGTTGTATTCTACATAATTATGCTCGTGATGTTTAACGTAGGTACTAAGTGTGCTAATTTGGTGTACTGCGTACAATAGTCGTTTTTTAGCCCTCCCTTTTTTTTTGCATTATTCTCTTCTGGTTATAGTGGAAAGTTTCTTGGATGCTACCACCTCTACTGTCTCAGATTTTGCTCCTTTTATTCNTGCTCATTTGATATCTGTTAGGCAGAAATTCATTCAACTAAGCAAAGCATAATCAANTAATGATAATATAGGTCTGTAAATGTAACTGCATTATCTGGTAGTGTTCGAGTTTTAGTTTCCTTTTTTTCACCGGCATTTGAATCTGGAACACACGAAATTGTTGTCTTGCGACAATTACGTGCAGACCAGGAATCGAGTTTTAATTGCTTGCAGAACTGAACAGAGGAAATAAGTAAAAATGTATTGGACTCGGCTTCAGGTGAAATCCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00010	458308	464525	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000010s00000959.1	PF06972.6	DUF1296	16	75	5.30E-31

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	135.253
SRR1783600	control	136.042
SRR1783602	moderate drought stress	239.756
SRR1811619	moderate drought stress	237.908

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	112.157
DRR006520	Root Summer glycyrrhizin high producing strain	110.070
DRR006521	Root Winter glycyrrhizin high producing strain	96.211
DRR006522	Root Winter glycyrrhizin high producing strain	93.464
DRR006523	Root Summer glycyrrhizin low producing strain	168.522
DRR006524	Root Summer glycyrrhizin low producing strain	167.214
DRR006525	Leaf Summer glycyrrhizin high producing strain	32.785
DRR006526	Leaf Summer glycyrrhizin high producing strain	32.426

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	81.228
SRR2868004	Drought Stress (root)	86.677
SRR2967015	Control (root)	115.208

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	33.405
SRR9715740	Leaf	40.299
SRR9715741	Leaf	40.977
SRR9715739	Root	69.385
SRR9715742	Root	94.470
SRR9715743	Root	87.345

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	146.398
SRR8749028	MeJA induced 9h	99.415
SRR8749029	MeJA induced 9h	132.983
SRR8749030	Uninduced	71.583
SRR8749031	Uninduced	95.829
SRR8749032	Uninduced	113.301

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	68.903
SRR8400027	Control - Root	65.465