Gene detail information of Glyur000010s00000950 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G46400.1 | 1.00E-163 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| NR | XP_004504242.1 | 0 | PREDICTED: uncharacterized protein LOC101508685 [Cicer arietinum] |
| trEMBL | tr|I1KSK4|I1KSK4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G12860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 409909 | 417603 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.853 |
| SRR1783600 | control | 5.938 |
| SRR1783602 | moderate drought stress | 8.288 |
| SRR1811619 | moderate drought stress | 8.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.654 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.543 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.233 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.186 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.958 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.849 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.051 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.250 |
| SRR2868004 | Drought Stress (root) | 6.359 |
| SRR2967015 | Control (root) | 6.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.466 |
| SRR9715740 | Leaf | 4.834 |
| SRR9715741 | Leaf | 4.393 |
| SRR9715739 | Root | 0.358 |
| SRR9715742 | Root | 2.090 |
| SRR9715743 | Root | 1.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.295 |
| SRR8749028 | MeJA induced 9h | 14.604 |
| SRR8749029 | MeJA induced 9h | 17.962 |
| SRR8749030 | Uninduced | 18.190 |
| SRR8749031 | Uninduced | 23.839 |
| SRR8749032 | Uninduced | 14.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.220 |
| SRR8400027 | Control - Root | 6.191 |