Gene detail information of Glyur000010s00000948 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51960.1 | 1.00E-33 | |
| NR | XP_003524987.1 | 8.69E-65 | PREDICTED: uncharacterized protein LOC100803307 isoformX1 [Glycine max] |
| trEMBL | tr|I1K452|I1K452_SOYBN | 3.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G29730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 398383 | 400375 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000948.1 | PF05347.10 | Complex1_LYR | 10 | 62 | 6.30E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.703 |
| SRR1783600 | control | 14.755 |
| SRR1783602 | moderate drought stress | 10.956 |
| SRR1811619 | moderate drought stress | 10.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.269 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.951 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.032 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.359 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.035 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.973 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.944 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.580 |
| SRR2868004 | Drought Stress (root) | 26.812 |
| SRR2967015 | Control (root) | 23.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.353 |
| SRR9715740 | Leaf | 29.049 |
| SRR9715741 | Leaf | 20.990 |
| SRR9715739 | Root | 7.690 |
| SRR9715742 | Root | 11.057 |
| SRR9715743 | Root | 10.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 60.244 |
| SRR8749028 | MeJA induced 9h | 32.488 |
| SRR8749029 | MeJA induced 9h | 69.354 |
| SRR8749030 | Uninduced | 44.606 |
| SRR8749031 | Uninduced | 54.458 |
| SRR8749032 | Uninduced | 39.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.495 |
| SRR8400027 | Control - Root | 21.791 |