Gene detail information of Glyur000010s00000943 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09650.1 | 7.00E-66 | ATP synthase delta-subunit gene |
| NR | XP_004515812.1 | 3.57E-123 | PREDICTED: ATP synthase delta chain, chloroplastic-like [Cicer arietinum] |
| COG | YP_005067202.1 | 1.00E-17 | ATP synthase delta chain [Arthrospira platensis NIES-39] |
| Swissprot | tr|Q02758|ATPD_PEA | 4.00E-108 | ATP synthase delta chain, chloroplastic (Precursor) |
| trEMBL | tr|I1K0B2|I1K0B2_SOYBN | 1.00E-115 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G03340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 365373 | 366116 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000010s00000943.1 | PF00213.13 | OSCP | 65 | 238 | 6.50E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.156 |
| SRR1783600 | control | 52.698 |
| SRR1783602 | moderate drought stress | 25.440 |
| SRR1811619 | moderate drought stress | 25.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.721 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.850 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.975 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.979 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.293 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.912 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1495.180 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1488.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.227 |
| SRR2868004 | Drought Stress (root) | 23.150 |
| SRR2967015 | Control (root) | 19.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 832.681 |
| SRR9715740 | Leaf | 1039.038 |
| SRR9715741 | Leaf | 559.433 |
| SRR9715739 | Root | 70.829 |
| SRR9715742 | Root | 47.312 |
| SRR9715743 | Root | 51.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.145 |
| SRR8749028 | MeJA induced 9h | 39.559 |
| SRR8749029 | MeJA induced 9h | 23.562 |
| SRR8749030 | Uninduced | 9.677 |
| SRR8749031 | Uninduced | 4.711 |
| SRR8749032 | Uninduced | 8.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.221 |
| SRR8400027 | Control - Root | 51.489 |