Gene detail

Gene detail information of Glyur000010s00000935

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G50400.1	0	purple acid phosphatase 27
NR	XP_006477032.1	0	PREDICTED: probable inactive purple acid phosphatase 27-like [Citrus sinensis]
COG	YP_630798.1	8.00E-14	metallophosphoesterase [Myxococcus xanthus DK 1622]
Swissprot	tr\|Q5MAU8\|PPA27_ARATH	0	Probable inactive purple acid phosphatase 27 (Precursor)
trEMBL	tr\|V4SZR4\|V4SZR4_9ROSI	0	Purple acid phosphatase {ECO:0000256\|RuleBase:RU361203}

Sequence

Transcript Sequence

>Glyur000010s00000935.1
TTGAAACCATACATAAATGATCAAATTTNAAAAGTAATTAAAGATTTAAAAATTCACATCACATACTTGAAAAGTCACGTAAGCGTAACTTTTATGTTTCACTCTACCTTTCAAGATTTGCCTTCTCTCTCTCCTTGTAGGCGGCTGCTAGGGTGACAGACCATTAGAAACCATTAGATTTATTAGTAAATAAATCAATGGTTCAGATGCGTTGTACCGAAATTGGAGAACATTGTGGAACTTCTTCGACACAATCCTTCCCCCACTTCCCCTACCTCACTCACTCACCACCCCACCCGTCCTTCCAGTTTCCAACAACGACCCACCACCCGCACCTTCCGCTGCATCCGGCGGAGCCGTCGCTGGACCCGACGCCCCCGCCTCCTCGGTGGCCATTCGCGCACTCATCCCGCTCTCCTCTCCAGACTCACTGCCTTCTTCGACGTGTTCCTCACCAGCATCGGTTTCGTCCTTGTCTCCGCCATCATGCTCGGCGTCGCCATCGTTGGGTGTATGATCTCTCGATCTCGTCGGAGAAGTCAGCGTATGCGGTGGCGCGGTAGTCGTGGCGGGCAGAGAAGATCAACCAGACTAGGTACATGGTGGCGGTGGTGAGGGCGCCGCATCCAACGCCGAAAAGCAAGATGGGAGGTGAAGTCAAGGCGTCCGGTGGAGAGCCCTAAGATGAACGTGACAGGGGGGTGTGCGGGTGAGAGATGAATCAAATGGAAGAATTCCACCCATCGAGACCGAGTGAAAAGCTGGTTGTTGAAGTTGGACTTCGTGTTTCCTCATCCAGGGCTCTGCGTACTCTTCCCTTTGATCCCCCGGCGCGTCGATTGTTGACTGCAAAAACACACACAAACGAGCAGAGTGGAACGAAGGGAGTGGAAAGAAAGTCAAAGTGGAATAATTCTGGGTATCCAAACACCATATGAATGAAACCCACATGCAGTCACCGATAGATAATAACTTGTTTATATTGGACCTCGACCTCTCGTGAGTGTGACAAATCAATCGCACATGACATGAACATGGGGGAACGAGAGAGCATTGTTTTTGGATGCCAAAGGCGCAGCAACATGATTCTGGTAGTAGCAGCGCTAGCGTGGTTGCTCAACGTGAACATCGTTTTGGGCTTTGCTCACTCTAATGGATTTGGAGAGCAACCACTCTCCAAGATTGCCATCCACAAGACCGTTGTTTCGCTCCACAGTACTGCCTCAATTACAGCCACCCCTTCTCTTCTCGGCACTAAGGGTGAGGATACCCAGTGGGTGAGGGTAGATGTTGGTTACCCTGACCCATCTGCAGATGATTGGGTGGGAGTTTTCTCTCCTGCAAAATTCAATTCATCAACCTGCCCACCCGTAAATGACCCAAAAGAACAGACTCCGTACATATGCTCGGCCCCAATAAAGTACAAGTTTGTNAATTACTCAAACTCACACTATACAAAGACAGGAAAAGCTTCTTTGAAGTTTCAGTTGATCAATCAACGTGCAGATTTCTCCTTCGCGCTATTTTCAGGCGGGCTGTCAAATCCTAAACTTGTGGCAGTTTCCAATTTCATATCATTTGTGAATCCTAAAGTGCCTTTGTATCCACGCCTTGCTCAAGGGAAGTCTTGGGATGAAATGNCAGTCACCTGGACAAGTGGATATGACATAAATGAAGCTATACCGTTTGTTGAATGGGGTCTTGAGGGAAAAAAGTCAGTGCAGTCTCCTGCTGGAACATTGACATTTGACCGTAACAGCATGTGTGGTTCACCTGCACGAACTGTTGGTTGGCGTGACCCTGGTTTCATACACACGAGTTTCCTCAAAAATCTGTGGCCAAATTTAGTGTATACATACCTGTTAGGGCATCTTTTGTCTAATGGTTCATATGTTTGGAGCAAGAAATATTCATTCAAGTCATCACCTTATCCTGGACAAGACTCACTGCAACGTGTTGTCATATTTGGTGACATGGGGAAGGCTGAGCGTGATGGTTCAAATGAGTATAGTGACTATCAACCTGGGTCACTTAACACCACGGACCAGCTTATCAAGGATTTAAACAATATTGACATTGTTTTCCACATAGGAGATATAACATATGCAAATGGATACATCTCACAGTGGGACCAATTCACAGCTCAAGTGGAACCAATTGCATCAAAAGTGCCATATATGATTGGCAGTGGTAATCATGAACGTGATTGGCCCAACACGGGATCCTTTTATGACACTACAGATTCAGGCGGCGAATGTGGAGTTTTGGCTGAGACCATAGAAGGATCTGAACAGTACAAATTCATTGAGCATTGCCTTGCAACAGTAGACAGACAGAAACAACCCTGGTTGATCTTTGCTGCTCATCGTGTGCTTGGATATTCCTCTGACTTCTGGTATGGATTGGAGGGGTCATTTCAAGAACCCATGGGAAGGGAAAGTTTGCAGAAATTATGGCAGAAATATAAAGTAGATATTGCATTTTATGGCCATGTCCATAACTATGAACGGACATGCCCCATTTATCAGAACCAATGCGTGAATACAGAAAAGTCTCATTATTCAGGCATTGTGAATGGAACAATTCATGTTGTTGTTGGAGGGGCAGGGAGCCACTTGTCGAATTTCAGCAATGTAACCCCAAAATGGAGTCTTTACAGAGACTATGACTTTGGGTTTGTCAAGTTGACAGCATTCAATCATTCATCTCTCCTCGTTGAGTACAAGAAAAGCAGTGATGGAAAGGTCTACGATTCTTTTACCATTTCAAGGGCTTACAAGGATGTCTTGGCCTGTGTGCATGATGGTTGTGAAGCAACCACTTTAGCATCTTGAACTGCGTCTTCATACACATAAAAGTTCTTGTGGTTAAAACATTGCTATGGCTAAAACATTTACAATTTGTAATGAGTACTCCCTGGTAAAAGTTATTGGTTACACCTTATGCAAGGAGGAAACTTGGCCTGTACAATTCATATGGTACATGTTAGATTACATAGCTGCAATTGTACAAACCAAATTATTAATAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00010	327991	335991	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003993 acid phosphatase activity

GO:0016787 hydrolase activity

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000010s00000935.1	PF00149.23	Metallophos	310	492	1.10E-15
Glyur000010s00000935.1	PF14008.1	Metallophos_C	517	577	9.20E-20
Glyur000010s00000935.2	PF00149.23	Metallophos	269	451	9.80E-16
Glyur000010s00000935.2	PF14008.1	Metallophos_C	476	536	8.40E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.404
SRR1783600	control	11.308
SRR1783602	moderate drought stress	15.359
SRR1811619	moderate drought stress	15.197

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.111
DRR006520	Root Summer glycyrrhizin high producing strain	9.716
DRR006521	Root Winter glycyrrhizin high producing strain	9.099
DRR006522	Root Winter glycyrrhizin high producing strain	8.818
DRR006523	Root Summer glycyrrhizin low producing strain	18.347
DRR006524	Root Summer glycyrrhizin low producing strain	18.207
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.507
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.601

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	32.168
SRR2868004	Drought Stress (root)	35.129
SRR2967015	Control (root)	38.254

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	30.676
SRR9715740	Leaf	25.082
SRR9715741	Leaf	42.908
SRR9715739	Root	4.066
SRR9715742	Root	14.353
SRR9715743	Root	11.991

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.811
SRR8749028	MeJA induced 9h	17.564
SRR8749029	MeJA induced 9h	10.728
SRR8749030	Uninduced	18.263
SRR8749031	Uninduced	4.755
SRR8749032	Uninduced	4.944

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.544
SRR8400027	Control - Root	19.677