Gene detail information of Glyur000010s00000924 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17680.1 | 9.00E-09 | disease resistance protein (TIR-NBS-LRR class), putative |
| NR | XP_003638275.1 | 3.49E-83 | Cc-nbs-lrr resistance protein, partial [Medicago truncatula] |
| trEMBL | tr|G8A1S5|G8A1S5_MEDTR | 1.00E-83 | Cc-nbs-lrr resistance protein {ECO:0000313|EMBL:AES85413.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 259661 | 260602 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.158 |
| SRR1783600 | control | 4.260 |
| SRR1783602 | moderate drought stress | 6.907 |
| SRR1811619 | moderate drought stress | 6.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.039 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.429 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.829 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.101 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.700 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.133 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.071 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.229 |
| SRR2868004 | Drought Stress (root) | 9.974 |
| SRR2967015 | Control (root) | 12.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.683 |
| SRR9715740 | Leaf | 12.424 |
| SRR9715741 | Leaf | 20.852 |
| SRR9715739 | Root | 3.066 |
| SRR9715742 | Root | 19.263 |
| SRR9715743 | Root | 12.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.061 |
| SRR8749028 | MeJA induced 9h | 37.495 |
| SRR8749029 | MeJA induced 9h | 26.154 |
| SRR8749030 | Uninduced | 19.176 |
| SRR8749031 | Uninduced | 6.014 |
| SRR8749032 | Uninduced | 8.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.404 |
| SRR8400027 | Control - Root | 12.033 |