Gene detail

Gene detail information of Glyur000010s00000915.4

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67580.2	9.00E-144	Protein kinase superfamily protein
NR	XP_007155526.1	0	hypothetical protein PHAVU_003G209300g [Phaseolus vulgaris]
COG	YP_004267788.1	3.00E-26	serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305]
Swissprot	tr\|Q7XUF4\|CDKG2_ORYSJ	0	Cyclin-dependent kinase G-2
trEMBL	tr\|V7CE12\|V7CE12_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW27520.1}

Sequence

Transcript Sequence

>Glyur000010s00000915.4
TCTTTGTTTTCCCTAATTGATACTTCTCACCATTGATTTTATTGTAAAAAAGAAGGAAGGAAACAAATCTCTACTAATTGATTCTTATTTTCAGTTTTTTTATTCCAATTGTTGATTACGGTTGTGTGAATCGTTGATATCGAATCTCTGAGGTTAGGGTTTTGAAATTTGGGAATTTTTTGAGGGTGTGGGTTTAGGGTTTCAAATACAATTCTTAATTACTTATTGAGAGGACTTGTTGTGCTTGTCAATCCCATGGCGGCAGGGCGAAAAAGTGTTTTGGGGAGGAGGGAATCTTACAAATATGGTTCCTTCGAGGAATTTGATCACTGTAAGAATGTGGATGGGTTTCTCGGTGGAAAAGAGGAGAGGGAAGAAGGTGAGATCTCCGTTGAACACGGGGAATATGCACACGTCTCACGGTTCCAAGCAGGTGATGGGGGTGAAGCTTTGCCACCGCCAGAGAAGAAAAGAAAGTTTTCTCCGATTGTATGGGATCTGGCAGGGAAGGAAGCGTCAATCTCTTCCAAAAGTAGGGCCACACATGGTGGAGCCAATGGTGTTTTAAGGGCGTCTTCACCAAATTCCTCTGACGTGTTGTCTCCAGAGCATTTGCAGAACCATAATCAGGATGTGGATGCAGGAAGTGGTGCGCAAGGATGGAACATCACAATGTCAAGATGGGCTTGCGATGGTCTTTCACCAATGGGCGGTGAGGATGATAAATGCAAGCAACGCAAAAGAAGCTCAAGCCCTGAAGTTGGTGAATTTCATAGAGGATCTTCGGAGAGCACAATCACTAGATCGGGTGGAAGAGATAACTCTTCTAATGGTGATATTGACTCTGAAGAGGAGTTCCTTATTGACTCCGCAGATGACGATGATGAACAAGTTAGTGATTCTGTGTCAGATTCCTTTGAAAATGGTGGTATAATGCATGTGCAGAGAAATATAAACATGTGTCAGAGTTGCAGAAGTGTGTGTGAGTTTGAAATGATTAAGAAAATAAATGAAGGAACTTATGGTGTTGTCTATAAAGCTAGGGATAAGAAGACTGGAGAAATAGTAGCATTGAAGAAGGTGAAGATGAACATAGAAAGGGATGGTTTTCCGATGTCATCCTTGAGAGAAATAAATATTCTCTTGTCTTTGAATCATCCTTCTATTGTGGATGTTAAAGAAGTAGTCGTGGATGATTATGATGGCACCTTTATGGTAATGGAGTATATGGAGTATGACCTTAAGGGGTTGATGGAGATAAAGAAGCAGCCCTTTAGTATAGGTGAAATAAAATCCTTTATGCAGCAACTTCTTGAAGGTGTCAAGTGTCTCCATGATAACTGGGTTCTCCATAGGGACTTGAAGACATCAAACATTCTGCTGAACAAAGAAGGGAAGCTGAAAATATGTGACTTTGGGTTGTCAAGACAGTATGGAAGCCCGCTGAAGCCATATACTCCTGTTGTGGTTACACTATGGTACAGAGCACCTGAACTGTTGTTAGGCGCTAAAGAATACTCAAAAGCAATTGACATGTGGTCTGTGGGTTGTATAATGGCCGAATTAGTTGCCAAGGAGCCTCTTTTCAGGGGTAAAACTGAACTTGAACAAATTGATAAGATTTTTCGAACCCTGGGGACACCAGATGAGAAAATTTGGCCAGGATTATCCAAATTACCTGGGCGTAAAGCGAATTTTGTCAAGCAACCGTATAATATGCTAAGAAAGAAGTTTCCGGCCACATCTTTCACTGGTTCACCACTTTTATCTGAGATGGGATTTGACTTGTTGGAGAAGCTTCTAACTTACGATCCTGAGAAGAGGATAACTGCAGAAGCTGCTCTCCTTCATGATTGGTTCCATGAAGCTCCACTTCCCAAATCTGATTTCAAGCCTGTGTTTTCTTGGCAGAGCTAGGACAGGTACTTATGCTAGAGCTGGATACAGGAAATACCAAGAATAATGCCTATTTTAACTGACAATGTTTTCAACTGTCTTACTGGTTAACGATCATATACCAAGAATGATGTGATTGCAAAGGACATGGTGATAGAGACTTCATTAGGCTTTTGTTTGTTATAAATTGGATTGGAAGCGGCCTATTGATGTACAATGAGCTGAGAAGGTATGGCATTGTACGTGAATTTTTTCTTCATTGAAATTCCATGTAACTTTTATGCAGTGAAAAATATGTACATATATTTCAGGACACAAGTAATAGATGATGAATTTTCGCTATGGTATGTTCTTATTCTGTGGCATTTGTTTCCAATTTTTCTTCTGGCCGTGTCGTCCAATTGGGGGGTGGGTTGGTTGGTTGGTGTTTTTCTGTTTACTATTGTCCTGCACTTAGTTTTTACACCAGGAAACGCTCCATTGGTCGCTGTTGGATATGTAGAAAGTAAATCAATGCAGGGAAACTTCATTTGCAACTTTGTCAACAGGTAATGTTAATTTTTAAACCTGAAAGTTGGTTCCTAAAATAAAACGATATTGTATGCAAGATGTGAATTTTGGCCATGGAGCATGCCGGAAAATGGGTTTAAGGGAAGCGGTTGATCGTTATGACGAAACTGGGTTTCATAAAGTGGCAGGGGTTGCAAGGATGACAATGCTCACCCTCAAGGTTTGGTGAAGTGACAACCACTTGCGCTCAATTTGTGCCTTCCAGTAGCCATGTAATCATTATTCAATGTTTGTGTTGGAACTCCCTTGTTGAGGATGGTGTAGACAACATTTGGAATTTCCTGTATTTATTTGGCAGAACACCCGCAGCTCAGAATCTTGTTCAGATCTACCATNCAAGGATAATC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00010	193584	197059	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000010s00000915.4	PF00069.20	Pkinase	245	535	4.10E-74

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	54.999
SRR1783600	control	55.729
SRR1783602	moderate drought stress	48.946
SRR1811619	moderate drought stress	48.120

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	71.169
DRR006520	Root Summer glycyrrhizin high producing strain	71.355
DRR006521	Root Winter glycyrrhizin high producing strain	217.412
DRR006522	Root Winter glycyrrhizin high producing strain	211.489
DRR006523	Root Summer glycyrrhizin low producing strain	111.076
DRR006524	Root Summer glycyrrhizin low producing strain	112.396
DRR006525	Leaf Summer glycyrrhizin high producing strain	42.132
DRR006526	Leaf Summer glycyrrhizin high producing strain	41.435

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	110.164
SRR2868004	Drought Stress (root)	159.048
SRR2967015	Control (root)	122.990

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	149.862
SRR9715740	Leaf	106.889
SRR9715741	Leaf	179.487
SRR9715739	Root	23.357
SRR9715742	Root	90.246
SRR9715743	Root	81.154

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	69.990
SRR8749028	MeJA induced 9h	91.180
SRR8749029	MeJA induced 9h	74.882
SRR8749030	Uninduced	110.723
SRR8749031	Uninduced	114.995
SRR8749032	Uninduced	99.848

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	114.544
SRR8400027	Control - Root	122.067