Gene detail information of Glyur000010s00000908 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G48490.1 | 1.00E-09 | |
| NR | XP_003525654.1 | 1.11E-39 | PREDICTED: uncharacterized protein LOC100807388 isoform X1 [Glycine max] |
| trEMBL | tr|K7KMV3|K7KMV3_SOYBN | 4.00E-40 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G03000.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00010 | 149903 | 150857 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.027 |
| SRR1783600 | control | 1.118 |
| SRR1783602 | moderate drought stress | 0.577 |
| SRR1811619 | moderate drought stress | 0.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.409 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.181 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.996 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.089 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.989 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.900 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.043 |
| SRR2868004 | Drought Stress (root) | 1.802 |
| SRR2967015 | Control (root) | 1.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.308 |
| SRR9715740 | Leaf | 0.283 |
| SRR9715741 | Leaf | 0.304 |
| SRR9715739 | Root | 0.490 |
| SRR9715742 | Root | 0.430 |
| SRR9715743 | Root | 0.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.929 |
| SRR8749028 | MeJA induced 9h | 8.850 |
| SRR8749029 | MeJA induced 9h | 11.600 |
| SRR8749030 | Uninduced | 5.801 |
| SRR8749031 | Uninduced | 9.212 |
| SRR8749032 | Uninduced | 11.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.710 |
| SRR8400027 | Control - Root | 1.945 |